Podospora pseudocomata: QC762_604380
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Entry
QC762_604380 CDS
T09797
Symbol
ssr3
Name
(RefSeq) SWI/SNF and RSC complex subunit Ssr3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
QC762_604380 (ssr3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsd03021
]
QC762_604380 (ssr3)
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_604380 (ssr3)
Transcription machinery [BR:
ppsd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
QC762_604380 (ssr3)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
QC762_604380 (ssr3)
PBAF complex
QC762_604380 (ssr3)
GBAF(ncBAF) complex
QC762_604380 (ssr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
87912041
NCBI-ProteinID:
XP_062740211
LinkDB
All DBs
Position
6:501108..503749
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AA seq
536 aa
AA seq
DB search
MQSQPQFRPYATPHGHPPHGTPHHGHGSHGGHPGPHAPPRSGASHRRGGIGPMMSAGPHP
QVPMTAAQINQQHYQAQQANQRAKIRSRKPTDKNLPDGIDELLVGGPDLAVAYRQLRDFE
RRLDATMTRKKLDIMDSLSRNTKHQRKLRIWINNTVEDQYWQASASSMDNFEFSSTSEAT
YRVTIEARLLDDPLDLDKDKGNEEDDAGKEADGEKMDTDDKPQQKPAPAKPGQRTRFAHF
FKALTVEPDRPKSGAHGNETIVEWKKPDKTPSGAQNLPAIADFDEFAFKRPGDENLNITI
NLFRHEEPERFAVSPELADIIDETDATLKEATLAVYEYIKLFGLQDDEETRNFRCDEYLK
KIVGRDMGMIGHLPDYITPHLRPLPPIKLPYTIRVDEEFHKNPTPTIYDVTVAVDDPMRA
RYLSFLHNPQHAGMLKEIARLDDQLATVCQALHESKARHTFFTSMANDPVGFVRTWLSSQ
KRDLDIILGESARGNGESIHGDEWRKGGRDSVWNTANARESVNVLLSRPPSRPQQR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcccaaccccaattccgtccctacgccacgccccacggccaccctcctcacgga
acaccacaccacggccatggcagccacggtgggcatcccggccctcatgcacccccaagg
tcaggagcatcgcaccgccgaggcggcattggccccatgatgtcggccggccctcatccc
caggtgcccatgacggcggcgcaaatcaatcagcagcattaccaagctcaacaggccaac
cagcgcgccaagatcagaagccgcaagcccaccgacaagaacctcccagatggcatcgac
gagctgctcgtgggtggccctgacctggcagtggcctataggcagttgcgtgactttgaa
cgccggcttgatgctaccatgacgcgcaagaagttggacatcatggactcactgtcccgc
aacaccaagcaccagcggaaactgcgcatctggatcaacaacacggtcgaggatcagtac
tggcaggcgagtgcatccagcatggacaactttgaattttcttccacttccgaagccacc
tatcgcgttactatcgaggcccgattgctcgacgacccgctcgatttggataaggacaag
ggcaatgaggaggacgacgccggcaaggaagccgatggcgagaagatggacaccgacgac
aagccgcagcaaaagcctgctcccgctaagcccggacagcggacgagatttgcgcacttc
tttaaagctctgacggttgagcctgaccgcccgaaatctggagcccacggaaatgaaact
attgtcgagtggaagaagccagacaagacgccctcgggagcacagaacctccccgcgatt
gccgactttgacgaattcgcattcaagaggcctggggatgagaacctcaacatcaccatc
aacttgttcagacacgaagaacctgagcggtttgctgtgagcccggaactggccgacatc
attgatgaaacagatgccaccctcaaggaagcaaccttggccgtctacgaatacattaag
cttttcggcctgcaggacgacgaagagactcgcaacttccgatgcgacgagtatctcaaa
aagattgttggccgcgacatgggcatgattggtcatctccccgactacatcacaccccat
ttgcgcccgttgccccctatcaaacttccttacaccatccgcgtcgacgaggaattccac
aagaaccccacgcctactatttacgacgtcacggttgctgtggatgaccccatgcgcgcc
aggtacctttccttcttgcacaacccacagcacgccggtatgttgaaggaaatcgcgcgc
ctcgacgaccagctggcaaccgtttgccaggcgcttcatgagtccaaagctcggcacacc
tttttcacgtccatggccaacgacccggttggatttgtccggacttggctgtcgtcacag
aagagggacttggacattatccttggtgaatcggcgaggggcaacggggagagcatacat
ggtgatgagtggcggaagggcggcagggatagcgtgtggaatacggctaatgcgagggag
agtgtgaatgtgctgctttctaggccgccgtcgaggccacagcaacgctag
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