Podospora pseudocomata: QC762_606180
Help
Entry
QC762_606180 CDS
T09797
Name
(RefSeq) ATP-dependent DNA helicase II subunit 1
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
QC762_606180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_606180
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_606180
Spliceosome [BR:
ppsd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
QC762_606180
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
QC762_606180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
SAP
HeH
VWA_2
Phi29_MCP
Motif
Other DBs
NCBI-GeneID:
87912216
NCBI-ProteinID:
XP_062740411
LinkDB
All DBs
Position
6:complement(<1188526..1192520)
Genome browser
AA seq
651 aa
AA seq
DB search
MGMAWGDYEERRYGGEEEDELDENDYKTQKDAVLFAIDVSASMLEPPPSSDDRKSDKDSA
VVAALKCAHQFMQQRIIAQPKDMMGILLFGTEKSKFRDETGSRSGSGYPHCYLFTELDVP
GAEDVKKLRDLVEEGEDADEVLVPSKEPVLMSNVLFCANQIFTTNAANFGSRRLFIITDN
ENPHGNDKQAKSSAAVRAKDLYDLGVTIELFPVSRAKKPFDLSKFYDDIVYRSSVEEGDN
SEEVKTSRSGDGLTLLNSLISNINLKQTPKRSYFSRMPFELAPGLTITVKGYMPLHQQKP
ARTCYVWLGGEQAQLAQSETTKVDSEARTVEKSEIKKAYKFGGEYIYFTPEEAKSLKELD
TKVLRIIGFKPLANIPMWASVKKSTFIFPSEDGYVGSTRVFSALWQKLLTSKKVGIAWFV
ARKNANPIMVAVIPSGSLNDEDEDSTAPYLPAGLWLYPLPFADDIRSVEIKTSTKPADEL
TDKMREIIQNLQLPKATYNPLKYPNPALQWHYKILQAMALEEDVPDALDDLTVPKYRQID
KRVGAYMAEWKQELADKAKEFMQLRATKRELEEDDAEERPRLAKRPKAAAGSASSGGQMS
NAELKAAWENDTLKKLTVAVLKDILTSKGISTTGKKVDLLERLEQWIEEHT
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggaatggcctggggagactatgaggagcgccgctatgggggcgaagaggaggatgag
ttggatgagaatgactacaaaactcaaaaagatgccgtactgttcgccattgacgtgagc
gcgtccatgttggagccacctccgagtagcgacgacaggaagtccgataaggattccgcc
gtggttgccgccctgaaatgcgcccatcaatttatgcaacagcgtatcattgcccaacca
aaagatatgatgggtatcctgctgtttgggactgaaaagtccaaattccgcgacgagact
ggtagtcggagtggctctggctatcctcactgctacctcttcactgagctcgatgtccca
ggagcggaggatgtcaagaaattgagagatttggtagaggagggagaggatgccgatgag
gtgctcgttccatccaaggaaccggtactcatgtcgaatgtgctcttttgtgccaaccag
attttcacgaccaatgctgccaacttcggctcgcgaagactgttcatcatcacagacaat
gagaatccacacgggaacgacaaacaggccaagtcatcggcagctgttcgtgccaaggat
ctctatgatcttggtgtgacgattgaactattccctgtcagccgggcgaagaagcccttc
gacctctcaaaattctacgatgatatcgtctaccgcagttcggtcgaggaaggggacaac
tctgaagaagtcaaaacatcaagatcgggcgatggcctgactcttctcaactccttgatc
tccaatatcaacttaaaacaaacaccaaagcgatcttatttctccaggatgccctttgag
cttgctccaggtcttacgatcacagtcaaggggtacatgccactccaccagcaaaagccc
gcccgcacctgctatgtgtggcttggtggagaacaagcccaactagctcaatctgaaact
accaaggttgattccgaggcgagaaccgttgaaaagagcgaaatcaaaaaggcctacaag
tttggcggcgagtacatttacttcacccccgaggaagcaaagtccttgaaggaactcgac
accaaagttctccgcatcatcggcttcaagccactggccaacatcccaatgtgggcctca
gtcaagaagtcaacattcattttcccaagcgaggacggttacgtcggttcaacccgtgta
ttttcggctctttggcagaagctattgacttccaagaaggtcgggattgcatggttcgtt
gctcgaaagaatgccaatcctatcatggtggctgtcattccgtcgggaagcctcaacgac
gaggacgaggattcaaccgcaccatatctccctgcagggctctggctttatcccttgccc
tttgcagacgatatcagaagcgttgaaatcaaaacctccaccaaacctgcggatgagttg
acagacaagatgagagaaatcattcagaaccttcaactgcccaaggccacatacaaccct
ctcaaatacccaaaccctgctttgcagtggcactacaagattctccaggccatggcactt
gaagaggatgttccagatgctttggatgacttgactgtgccaaaatacaggcaaattgac
aagcgggtaggtgcgtatatggccgagtggaaacaagagttggcggacaaggcgaaagag
tttatgcaactccgagccactaaacgcgaactcgaagaagacgatgcggaagaaagacca
cgactggctaagcggccaaaggccgcagcaggcagtgctagttctggtggtcaaatgagc
aacgcagagctcaaagctgcctgggagaacgacacattgaagaagctcacggtggctgta
ctcaaggatatcttgacaagcaaaggaatcagcacaactggaaagaaggttgatttgttg
gagagactcgagcaatggatcgaggagcatacgtga
DBGET
integrated database retrieval system
