Podospora pseudocomata: QC762_606590
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Entry
QC762_606590 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC762_606590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_606590
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
QC762_606590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
87912253
NCBI-ProteinID:
XP_062740875
LinkDB
All DBs
Position
6:2660280..2665384
Genome browser
AA seq
1415 aa
AA seq
DB search
MEPSTPMRPIPGAYINTPAPNTTRRQLFTNNPGNGVPPPMALPPANPVGPGTQALVTGQL
PAPPVARADVPLIETAGHVVNSNLLNDESYPDLDSYCRPGASSEYDIHPPDRPWAPFQKT
HMYQIPDQIFDFLNGGEVFTKLGLFPELGYAWASIDSSLFLWDYTHPTPELIGYEELTTT
ITAVTLVAPKPGVFVKTITHILVISTTTDVVLVGVAAETNASGAKKVTLYQTKMAVHRGG
SDVSYIVGTANGRIFVGGETDTDIHEIVYQQEERWFSSRCSKVNHTHPGWSSVVPLTNLP
FGPRPHEHLVGLYVDDTRNLVYSLSDRSTIRTYHMEGPEKLTKVIEKDKTSILRDFAHLA
APSPLFTDRTTIVSLSPITATETSKLHLMALTDTGCRLLLSATSAASYTIGGGSSTLPPQ
SMQLQFIKFPPREEYQRTRDHRLQPIETVLDKTSQLLEISAMGVRFPPGYFFDVVRDRTA
ASDRLFISAPDTGRIKLTQPTSALKYFEQGTWIDLGAGNRTIEIGLTTKPFSANSQPLGF
GNELAVQFDQAPGEFAILTNTGVHIIRRRRVVDMLATALRSVQGQGDDVLELEVRHFLAQ
YGRVETCSAALAVACGQGNDSRTGIGRSSDTGLANLARLVFVEYGGQARVAESDGRMAPQ
DSVRLSSRHDALVLYFTRLVRTLWKTKVVTIAKDGKEVTSTVDVKKLVQVQEQVDRLENF
LETNKGTIQGLSGPPGTLTNRNDEIAAQKEHQAFHGMRQLMKSVTEGISFVTMLFSERVA
DIYGRLEPADQQRLSQLTYEHLFSQKAGKDLAKVLVKAIVNRNIANGANVDTVADGLRRR
CGSFCSPDDVVIFKAQEQLQRASDQVANASAARLLLAESLRLFQEVAGSLSADNLERAVN
QYIELKYYAGAIQLCLVVAKEKDRGNTALTWVMDNRPASDVRERAYNARKSCYILIQQVL
DALEGYLSTEPETIDGRQTVAATKRKEAYDVVNNSDDQVFHIDLYEWYISKGWIDRLLAI
DSPHVEAYLQQLSEQNYTHADLLCRWYTHRNFFFQAAQVQANIAKSDMAIPIKHRIKLLG
LAKANASVNTAGVSRQQQQMLNHEVSEMLEMAHIQDDLLQRLLADGRIDNSRKAEVNDHL
NGPILSVNELYNDYIDQAGYYDLSLLIFHLADFQNHRVIEETWSNLIHQVHNETEIKTEL
WNKRDGNGVPAELRDQIPEAEPPRPWECVAQNVQIIAHRASLDSLVFPVDKVIPMVCGYA
IEYNQDLESPNWPMALFQQLHVPHALIVQVLEGVLDAQEVPFVGRKRKNVAGWVVAVVED
WVTSIQMRGGRNSADAGGVGVWVSELLGRVDALLRQFQSAGARTEADKKLRDEAAQLRGE
LATVKRRVDGLVAATAQGGMGGSVMGGFGFRGGLA
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggagccctcaacgcccatgcgccccatccccggcgcttacattaacactcctgcgcca
aacaccacgcgacgacaactctttaccaacaaccctgggaatggtgtgccaccacctatg
gcactcccacccgcgaacccagttggccccggcactcaggctctcgtgacaggccagctt
ccggcaccgcctgttgcccgcgcagacgtccctctgatcgaaacggctggccatgttgtc
aactcaaatctcctcaacgatgagagctatcctgacctggactcatactgccgacccggc
gcttcctccgagtatgacatccatccgccggacaggccatgggcgccttttcaaaagacc
catatgtaccaaattcctgaccagatcttcgacttccttaatgggggagaggtcttcacg
aaactaggcctcttcccagagctcggatatgcctgggcctccatcgatagttcgctcttc
ctctgggactacacgcatcccacgccagaactcatcgggtacgaggaattgaccaccacc
atcaccgccgttaccctcgttgcgccaaagccaggcgtattcgtcaagaccattacacat
attcttgtcatctccacaacaaccgatgttgttcttgttggcgtggcggccgagaccaat
gcgtcgggagccaagaaggtcacgctctaccagaccaagatggctgtgcaccgtggtggc
agtgatgtcagttacatcgtcggaaccgccaatgggcgcatctttgtcggtggcgaaacg
gacaccgacatccacgaaattgtttaccagcaagaagagagatggttctctagcagatgc
agcaaagtcaaccatacccatcccggctggtcctctgttgtaccactgaccaacttgcca
tttggcccccggccacacgaacacctcgtgggtctctatgttgacgatactcgaaacctt
gtgtactcgctatctgaccggtcgaccatccgaacctatcacatggagggccccgaaaag
ctcaccaaggtgattgagaaggacaagaccagcatcctccgcgactttgcccacctggct
gccccatcacctctcttcaccgacaggactaccattgtgtcactcagtcccatcaccgcc
accgagacgtcgaaactccatctcatggctctcaccgatactggctgtcgccttcttctc
agcgccacgagcgctgcttcatacaccatcggcggtgggtcatccacccttcctcctcaa
agtatgcagctgcagtttatcaagttccctcccagggaggagtaccaacggactagggat
cacagactccaacctatcgagacggtactagacaagacatcgcagcttcttgaaattagc
gcaatgggtgtgcgcttccctccaggttacttctttgacgtcgtccgtgacaggaccgct
gcttcggacaggctttttatctcggctcccgatacgggccggatcaagttgacacagcct
acctcggcgctgaaatactttgagcagggcacgtggattgacctcggcgccggcaaccga
accattgagatcggtttgacgaccaagcctttctcggcaaacagtcagcctctaggcttc
ggcaatgagctcgctgttcagttcgaccaggctcccggggagtttgcgattctcacaaac
actggcgtacacatcattcgccggagaagggtggtggatatgcttgcgactgccctcaga
tctgtccaaggtcagggcgacgacgtgctagagctggaggttcgccactttcttgctcag
tacgggagagtggaaacctgctcggcggcgctggcagtagcgtgtggtcagggcaacgac
tcgcggacgggtattgggcgatcctcggacaccggccttgcgaaccttgcccgcttggta
tttgtggaatacggtggccaagccagagtggcggagtcagacgggcgcatggcccctcag
gattctgttaggttatcgtcccgtcacgatgcgttggtgctgtactttacccgccttgtc
aggacactctggaaaaccaaggtcgtcacgattgcgaaggacggcaaggaggtgacctcg
accgtagacgtcaagaaattggtgcaggttcaggaacaggtcgaccgtctggagaatttc
ttggagaccaacaagggcacgatccaaggcctctctggccctcccggtactctgacaaac
agaaatgacgagattgctgcgcaaaaggaacaccaggctttccacggcatgcgtcagctc
atgaagagtgtgacggagggcatttccttcgtcactatgctttttagcgagagagttgcg
gatatctatggtcggctcgaacctgccgaccaacaaaggctctctcagcttacctatgag
cacctgttctcccagaaggccggaaaagacctcgcaaaggtgttggtcaaagcaatcgtc
aaccgcaatatcgctaatggcgccaatgtggatacggtcgctgatggcctaaggagacgt
tgcgggagcttctgctctcctgacgatgtggtcatcttcaaggcccaagagcagttgcag
cgcgcgagtgaccaggttgctaatgccagcgccgctcgtctgctgctggccgagagtttg
agactctttcaggaggtcgctggcagtctttctgccgacaacctcgagagggctgttaac
cagtacatcgagctcaagtactacgccggtgctattcagctgtgcttggtggttgccaag
gaaaaggaccggggcaacactgcattgacatgggtgatggacaacaggccggcgagtgat
gttcgtgagagggcgtacaatgccaggaagagctgctacatcctgattcagcaggttctt
gacgcgctcgagggttacctctccacggagcctgagacgattgatgggcgccaaacggtc
gctgccaccaagaggaaagaggcctacgatgtggttaacaactcggatgatcaagtgttt
cacattgacctgtacgagtggtacatctccaagggctggattgataggctacttgccatt
gactcgccacacgttgaggcttaccttcagcagctctctgagcagaattacactcacgct
gacctcctctgccggtggtatactcaccgcaacttcttcttccaagcggcccaagtccaa
gccaacattgccaagtcggacatggccatccccatcaaacaccgcatcaagctgcttggt
ttggccaaggcgaatgccagtgtcaacactgctggcgtgagccgtcagcagcaacaaatg
ttgaaccatgaggtgtctgaaatgctcgagatggcgcacatccaggatgatttgctgcag
agattgcttgcagacggccggatagacaacagcaggaaggccgaggtcaatgaccatttg
aacgggccgatcctcagcgtgaacgagctctacaatgactacatcgaccaagccgggtac
tacgacctcagcctcttgatcttccaccttgccgacttccaaaaccaccgcgtcatcgag
gagacgtggagcaacctcatccaccaggtccacaacgagacggagatcaagacggagctg
tggaacaagcgcgacgggaatggggtacctgccgagctgcgggatcagatccccgaggct
gagccgccgaggccgtgggagtgtgtagcgcagaacgtgcagattattgctcaccgcgcc
tcgctggacagtctcgtcttccccgtcgacaaggtcatcccgatggtgtgcggttatgcg
attgagtacaaccaggatttggagagccctaactggccgatggcgctgtttcagcagctt
catgtcccgcatgcgcttattgtgcaggtgttggagggggtgctggatgcgcaggaggtt
ccttttgtggggaggaagaggaagaatgtggctggctgggttgttgctgttgtggaggat
tgggtgacttcgattcagatgaggggggggaggaattcggctgatgctggtggggttggg
gtttgggttagtgagttgttgggacgggtggatgcgttgctcaggcagtttcagtctgcg
ggggcgaggacggaggcggataagaagttgagagacgaggctgcgcagttgaggggggag
ttggctaccgtcaagaggagggtcgatgggcttgtagcggcgacggcgcagggggggatg
gggggaagtgtgatgggaggttttggttttaggggcggattggcttag
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