Podospora pseudocomata: QC762_608980
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Entry
QC762_608980 CDS
T09797
Symbol
SUA7
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QC762_608980 (SUA7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsd03021
]
QC762_608980 (SUA7)
Transcription machinery [BR:
ppsd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
QC762_608980 (SUA7)
Prokaryotic type
Archaeal type
TFB
QC762_608980 (SUA7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
PPR_long
RB_B
AIPR_N
Motif
Other DBs
NCBI-GeneID:
87912481
NCBI-ProteinID:
XP_062741168
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All DBs
Position
6:3517965..3519011
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AA seq
348 aa
AA seq
DB search
MSALYPPHPSSASGEYKEDLNAILMCAECKEFPPNLIEEFSSGDMVCESCGLVLGERIID
TRSEWRTFSNDDQGNDDPSRVGDGPNLMIDGDQLQTTIAFDGKGAKNLSHLQNKMTNDKG
SKQLLNAYRDIQSFTDSINTGTQVANAAKHIYKLVDDAKALKGKSQEAIIAGCIFIACRQ
ANADRTFREIYRLTKVSKKEIGRVFKQLETFLQKAGGADDITKAGPFNQTYQAKASTTAV
GLCARYCSNMGFRNPVRVEDVARRLAKKSQQVADLAGRSPLSVAAACIYMASHLVGEPKA
SKEIAGVAGVSDGTVKTAYRYLYQAKDALLTKEEFPDDMPDASKLPAN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccctttatcctcctcatccctcctcggcttccggcgagtacaaggaggacttg
aacgccatcctcatgtgcgccgagtgcaaagagtttccgcctaacttgatcgaggaattc
tcatcgggcgacatggtttgcgagtcttgtggattggtcctaggtgagcgtattattgat
acgcgctccgagtggcggacattctcgaatgatgaccagggtaacgacgacccttctcgt
gttggtgacggtcccaatttgatgatcgacggcgatcaactgcaaacgacaatcgctttc
gacggcaaaggtgcaaagaacctgtcccatcttcaaaataagatgacgaacgacaagggc
tccaagcaactgctcaatgcgtatcgggatattcaaagctttaccgacagcatcaacacg
ggtacccaagttgcaaatgctgcgaagcacatttacaagttggtcgacgatgccaaggcc
ctcaagggtaaatcgcaagaagcgattatcgccggatgcatcttcatcgcctgtcgacaa
gcaaatgctgaccgtactttccgtgagatttatcgcctcaccaaggtctccaagaaggag
attggccgcgtcttcaagcagcttgagaccttcctgcagaaggccggcggtgccgatgac
attaccaaggctgggccattcaaccagacctaccaggccaaggcctctactactgctgtc
gggctgtgcgctcgctattgcagcaacatgggtttccgcaacccggtcagggtggaggat
gtcgcgagacgtcttgccaagaagtcgcaacaggtggctgacctcgctggtcgttctccc
ttgtcggttgcggcggcgtgcatctacatggcctcgcatttggttggagaacccaaggcc
tccaaggaaatcgctggtgtggctggcgtcagtgatggtacggtgaagacggcttatcgc
tacctttaccaggccaaggatgctctccttaccaaggaggaatttccagacgacatgccc
gatgcttccaagctcccggccaactag
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