Podospora pseudocomata: QC762_610600
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Entry
QC762_610600 CDS
T09797
Symbol
SEM1
Name
(RefSeq) 26S proteasome complex subunit
KO
K10881
26 proteasome complex subunit DSS1
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03050
Proteasome
ppsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
QC762_610600 (SEM1)
09124 Replication and repair
03440 Homologous recombination
QC762_610600 (SEM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_610600 (SEM1)
04131 Membrane trafficking [BR:
ppsd04131
]
QC762_610600 (SEM1)
03051 Proteasome [BR:
ppsd03051
]
QC762_610600 (SEM1)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_610600 (SEM1)
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
QC762_610600 (SEM1)
Membrane trafficking [BR:
ppsd04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
QC762_610600 (SEM1)
Proteasome [BR:
ppsd03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
QC762_610600 (SEM1)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
QC762_610600 (SEM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSS1_SEM1
Motif
Other DBs
NCBI-GeneID:
87912646
NCBI-ProteinID:
XP_062741350
LinkDB
All DBs
Position
6:4007744..4008616
Genome browser
AA seq
159 aa
AA seq
DB search
MSLLGGPGIARQSQSPVWAPSTSNSRPPPALLCTSTTPPIPPPSQPTSPPETRYDPDPTH
TTTTHIKMATSKAPSADPKSSSDLPAEQPQQQKQQTLEEDDEFEDFPVDDWQADDTEATQ
NQQPQHLWEESWDDDDTTDDFSNQLKEELKRVEASKNKR
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcctgggcggcccaggcatcgcaaggcaatcgcaatccccagtctgggcacca
agcacaagcaacagccgcccgccgccggctttactctgtacatcaacaacgcctccgatc
ccccctccatctcaaccgacttcccctcctgaaaccagatacgacccagatcctacccac
accacaaccactcacatcaaaatggccacctccaaggccccctctgcggaccccaagtcc
agctccgaccttcccgccgagcagccccaacagcaaaagcagcagaccctcgaggaggat
gacgagtttgaggacttccctgtcgatgactggcaagcggatgacacagaagccacccag
aaccagcagccacaacatctctgggaggagtcctgggacgacgatgacacgacagatgat
ttttccaaccaactcaaggaggagcttaaaagggttgaggcgtccaagaacaaacggtga
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