KEGG   Podospora pseudocomata: QC762_610600
Entry
QC762_610600      CDS       T09797                                 
Symbol
SEM1
Name
(RefSeq) 26S proteasome complex subunit
  KO
K10881  26 proteasome complex subunit DSS1
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd03050  Proteasome
ppsd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    QC762_610600 (SEM1)
  09124 Replication and repair
   03440 Homologous recombination
    QC762_610600 (SEM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsd03019]
    QC762_610600 (SEM1)
   04131 Membrane trafficking [BR:ppsd04131]
    QC762_610600 (SEM1)
   03051 Proteasome [BR:ppsd03051]
    QC762_610600 (SEM1)
   03400 DNA repair and recombination proteins [BR:ppsd03400]
    QC762_610600 (SEM1)
Messenger RNA biogenesis [BR:ppsd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     QC762_610600 (SEM1)
Membrane trafficking [BR:ppsd04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    QC762_610600 (SEM1)
Proteasome [BR:ppsd03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     QC762_610600 (SEM1)
DNA repair and recombination proteins [BR:ppsd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     QC762_610600 (SEM1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 87912646
NCBI-ProteinID: XP_062741350
LinkDB
Position
6:4007744..4008616
AA seq 159 aa
MSLLGGPGIARQSQSPVWAPSTSNSRPPPALLCTSTTPPIPPPSQPTSPPETRYDPDPTH
TTTTHIKMATSKAPSADPKSSSDLPAEQPQQQKQQTLEEDDEFEDFPVDDWQADDTEATQ
NQQPQHLWEESWDDDDTTDDFSNQLKEELKRVEASKNKR
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtccctcctgggcggcccaggcatcgcaaggcaatcgcaatccccagtctgggcacca
agcacaagcaacagccgcccgccgccggctttactctgtacatcaacaacgcctccgatc
ccccctccatctcaaccgacttcccctcctgaaaccagatacgacccagatcctacccac
accacaaccactcacatcaaaatggccacctccaaggccccctctgcggaccccaagtcc
agctccgaccttcccgccgagcagccccaacagcaaaagcagcagaccctcgaggaggat
gacgagtttgaggacttccctgtcgatgactggcaagcggatgacacagaagccacccag
aaccagcagccacaacatctctgggaggagtcctgggacgacgatgacacgacagatgat
ttttccaaccaactcaaggaggagcttaaaagggttgaggcgtccaagaacaaacggtga

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