Podospora pseudocomata: QC762_610870
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Entry
QC762_610870 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03013
Nucleocytoplasmic transport
ppsd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
QC762_610870
03015 mRNA surveillance pathway
QC762_610870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsd03019
]
QC762_610870
Messenger RNA biogenesis [BR:
ppsd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
QC762_610870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_AKAP-17A
RRM_PARP14_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
87912674
NCBI-ProteinID:
XP_062741380
UniProt:
A0ABR0G9H1
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All DBs
Position
6:4080827..4085870
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AA seq
340 aa
AA seq
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MDTDRRSRSRDPVSRDEPADHYRPESRNRSPSRTPSEAMDRYDTHDRTSQARSPAPRNGR
PRTYSRSLSRSRSRSLSRSRSRSRSRSYSRDRSWSRSRSRTRTRSPTPQARSTKIVVERL
TKNVNEDHLREIFGQYGEIEDLDLPLNRQLGTNRGTAYILFYNEADAEAAIAHMHEATVD
GAVINVSIVLPRRKLSPAPPTARRGANINPRIPPPHQSRPFGGNIGGGGGGGHGRGSGPG
RHGNRSDTYRPRSLSRSRSRSPVLAGGNHNRRQRSPSYSSRSRSRTPPPARGGGRGSRHV
GGRYDGDDDRDNRRSASRDSYDSYDRRSRSPSRHRDRGGR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggatacggatagaagatcaagatccagggaccctgtgtctcgtgacgaaccagccgat
cactaccggcccgaatcccgcaatcgttccccatcgcgaaccccctccgaggccatggat
cgctacgacacacacgaccgcacctcccaagcccgctctccggccccgcgcaacggaaga
cctcggacttacagtcgcagcctatcccgtagccgtagccgtagcctcagtcgaagcaga
agccgcagtcgtagtcgaagctactcgcgcgatcgcagctggagtcgctcaagaagtcgc
actcgcactcgcagtcccacgccccaggccagaagcaccaagattgttgtcgaacgtctc
accaagaacgtgaacgaagaccacctacgagagatctttggccagtacggcgagattgag
gacttggacctgcctctcaaccgtcagcttggaaccaaccgtggcacagcttacattttg
ttctacaacgaagccgacgccgaggctgccattgcccacatgcacgaggccactgtagat
ggcgccgtcatcaacgtttccatcgtgctaccccgccgcaagctctcacccgcaccccct
acagctcgccgcggagcaaatattaacccgcgtataccgccccctcatcagtccagaccc
tttggcggcaacataggtggtggtgggggagggggtcatggacgtggatctgggccaggt
cgtcatgggaaccgttctgatacctaccgtccccgttctctctcaaggtcgagatctcgg
tcacccgttctggcaggagggaatcataatcgcaggcaaagatccccttcgtattcatcc
cggtctcgatccaggactccaccaccagcccgcggtggaggacgagggagtcgccatgtc
ggtgggcgctacgacggcgacgacgatagggataatcgcagaagcgctagccgcgacagc
tatgatagttacgaccgtaggagcagaagccccagtcgccatcgggaccgtggagggagg
tga
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