Podospora pseudocomata: QC762_611830
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Entry
QC762_611830 CDS
T09797
Symbol
MRE11
Name
(RefSeq) meiotic recombination
KO
K10865
double-strand break repair protein MRE11
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03440
Homologous recombination
ppsd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QC762_611830 (MRE11)
03450 Non-homologous end-joining
QC762_611830 (MRE11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsd03032
]
QC762_611830 (MRE11)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_611830 (MRE11)
DNA replication proteins [BR:
ppsd03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
QC762_611830 (MRE11)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
QC762_611830 (MRE11)
BRCA1-C complex
QC762_611830 (MRE11)
NHEJ (non-homologous end-joining)
MRX complex
QC762_611830 (MRE11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
DUF445
ResT-TelK_cat
Motif
Other DBs
NCBI-GeneID:
87912763
NCBI-ProteinID:
XP_062740128
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All DBs
Position
6:209141..>211645
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AA seq
730 aa
AA seq
DB search
MPQAPEEDTIRILVSTDNHVGYAERDPIRKDDSWRTFDEIMQIAKAQDVDMVLLGGDLFH
DNKPSRKSMYQVIQSLRKNCLGMKPCELEFLSDPQEVFGASTGCVNYQDPDINISIPVFS
IHGNHDDPSGDGHYCSLDLLQAAGLVNYFGRVPEADNIHVKPVLLRKGETKLALYGLSNV
RDERMHRTFRDNKVHFYRPGQQRNDFFNLLTLHQNHYAHTPTSYVSENMLPEFMDLVIWG
HEHECLVDPIKNDITNFHVIQPGSSIATSLVEGEAVTKQVAILNITGRRFTVDKISLKTV
RPFVTREVVLAEDKRFKGLEKKQDNRQEVTKRLMTIVEEMIEQANALWESTHGGDAAEDE
ETPLPLIRLKVEYTAPEGSKFDVENPQRFSNRFASRVANQNDVVYFYRKKTAVTRKIPND
SKELREGVAEALESVDTIKVDTLVQEYFAQQSLKILPQAPFGDAVNQFVNKDDKHAVEMF
LLESLSTQVKGLLQLDDEKVTDDLEAQIEEYRKVMEKDFVIGQHKQAQRKRRFKPKPNGW
DSDVDGHWHAQPEALEELVASPPQATFKSRGGARPTSGVVFSDENEDMLEEEPVAAEPKR
AARGARKTAATPAKKAAVAKKAAAPAKKATMRTAKAAARGRKRGNPFEDSDEEEEDVIME
DDGFEPPPPSTRAIRGATKSTRQTTLNFASQSQKPARATQKAIEISDDEISEDDDAFETM
PATSKRGKRR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagctccagaagaggacactatccgcatactggtgtcgaccgacaatcatgtg
ggctatgcagagcgggatccaatccggaaagatgatagctggcggaccttcgatgagatc
atgcagatagcgaaagcccaggacgttgacatggttcttcttggcggcgacctcttccat
gacaacaagccatctcgaaaatccatgtatcaagtcatacaatctctgcggaaaaactgt
ctgggcatgaagccctgtgagttggagtttctgagtgatccgcaagaggttttcggtgca
tcaaccggctgcgtcaactaccaggaccccgacatcaacatctccattccagtcttctct
atccatggaaatcatgacgaccccagtggcgatggtcactactgttcgctcgatcttcta
caggctgccgggctcgtcaactactttggccgtgtgcctgaggcagacaacatccacgtc
aagccggttctcctgcgaaagggagagactaaactggccctctatgggctaagcaatgtt
cgtgatgagcggatgcacaggacattccgagacaacaaggttcacttttatcggccaggc
cagcagaggaacgacttcttcaacctactgacccttcatcaaaaccactacgcccacaca
ccaaccagttacgtatcagagaacatgctgcccgagtttatggaccttgtcatctggggc
cacgaacacgaatgcttggtggatcccataaagaacgatatcaccaatttccatgtcatc
caacccggttcctccatagccacctctcttgtggagggcgaggcggtaacaaagcaggtt
gcaattctcaacataaccggcaggcgtttcacggtagacaaaatttccctgaaaacggtc
cggccattcgtcaccagggaggttgtgctggcggaagacaaacgattcaaggggctcgag
aagaaacaggacaaccgccaagaagtcaccaaacgcttgatgacaattgttgaagagatg
attgagcaagctaatgccctgtgggagtccacccacggcggtgatgctgccgaggatgag
gagacgcctcttcccctgatacgactcaaagtggaatataccgctccggaaggctccaag
tttgacgtggaaaacccccagcgcttctccaacaggtttgccagcagggtggccaatcag
aacgacgtcgtgtacttttaccgaaagaagacagcagtcacaaggaaaattcccaacgac
tcaaaggagctgcgagaaggcgttgcagaagccctggaatcggtcgataccatcaaggtc
gacactcttgtgcaggaatactttgcccagcagtctttgaagattctgccacaagctcct
tttggagatgctgtcaaccagttcgtcaacaaagatgacaagcatgctgtggagatgttt
ctactcgagtcactctccacgcaggtcaaggggctgctgcagctcgatgacgaaaaggtg
acggacgacttggaggcacaaatcgaggaatacaggaaagtcatggagaaagattttgtc
atcggccagcacaagcaagcacaacgcaagaggaggttcaagcccaagcccaatggctgg
gattctgatgtggatggccactggcatgcccagccggaagcgcttgaagagctggtggca
tctccaccacaggcaactttcaagagccgaggcggtgctcgcccaacctctggcgttgtc
ttcagtgatgagaacgaggacatgttggaggaggaaccggtcgcggcggagccaaagcga
gcagcgagaggagcccgaaagactgctgccacaccagccaagaaagcagcagtggccaag
aaggcggcagcgcctgcgaagaaagccacgatgaggactgccaaagcagctgcacgaggt
cgaaaaaggggaaaccccttcgaggacagcgacgaagaagaagaagacgtgatcatggag
gacgatggttttgagccacctccaccctcgacacgtgctatacggggcgctaccaaaagc
actcggcaaaccacactcaactttgcctcgcagtcccaaaaaccggccagggcgacgcaa
aaggcgatcgagatcagtgacgatgagatttcagaggatgatgatgcctttgagaccatg
cccgccacgagcaagaggggcaagcgtcgctga
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