Podospora pseudocomata: QC762_702730
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Entry
QC762_702730 CDS
T09797
Symbol
DRS1
Name
(RefSeq) nucleolar DEAD-box protein required for synthesis of 60S ribosomal subunit
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_702730 (DRS1)
03009 Ribosome biogenesis [BR:
ppsd03009
]
QC762_702730 (DRS1)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC762_702730 (DRS1)
Spliceosome [BR:
ppsd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
QC762_702730 (DRS1)
Ribosome biogenesis [BR:
ppsd03009
]
Eukaryotic type
Pre-60S particles
Helicases
QC762_702730 (DRS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Utp25_C
Motif
Other DBs
NCBI-GeneID:
87913034
NCBI-ProteinID:
XP_062739034
LinkDB
All DBs
Position
7:complement(808599..811498)
Genome browser
AA seq
797 aa
AA seq
DB search
MAPVQKKRKTVDDDFILTISDNEEIPNEEEDVEVAAAAARPKKKTKTVKKEKKGKKGKKQ
QRQEGEDEEEEEEKDDKEAVWDDGAMDSDFEFALEGVNDFGEEFDGAWGFDDAKKNMLKG
GENKVMVDLDAIIERRRAKKEAKAGKKKEEEKEEEVEEEDEEIAEVDLDDDDDEVLAEDG
FGMGVGSDVEEEEEEPKDGSDSEDEDEEKDGEADDDDDAASDNDSVATPINHPDDEKDSE
SEDDEEDAEEAAKRKEFFADEDDVKQEKGVHSSFLEMSLSRPILKGLNSVGFTKPTPIQS
KTIPIALMGKDVVGGAVTGSGKTGAFLVPILERLLYRSKKVATTRVVILAPTRELAIQCH
AVGVKLASHTDIKFCLAVGGLSLKVQEQELRLRPDVVIATPGRFIDHMRNSASFAVETVE
ILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTSSVDRLIRAGLNKPVRIQVD
SQKKTASNLRQEFVRLRPGREKKRMGYLVHICKTLYTERVIIFFRQKKIAHETRIIFGLL
GMSCAELHGSMNQAQRIASVEAFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQNLEI
YIHRIGRTARAGRSGVALTLAAEPDRKVVKAAVRAGKAQGAKITSRIIEASDADKWQDQI
DEMEGEIKEIMQEEKEEKQLQQVEMQVKKGENMIKYEEEIASRPKRTWFETQDDKRAAKL
AGREELNGIREQLKKKSQGKLSNKDKKKLDAKQEMKEGRTWKKGKEERAGKGAVLNLSKV
KKPKTKGPAGKKSFKRR
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgttcaaaagaagagaaaaaccgtcgacgacgacttcatcctcaccatctcc
gacaatgaggaaatcccaaacgaggaggaggacgtcgaggttgccgctgccgccgctcgg
ccaaaaaagaagaccaagactgtgaagaaggagaaaaagggcaagaaggggaagaagcaa
caacgacaggagggggaggatgaggaagaagaggaggagaaggacgacaaggaggctgtt
tgggatgatggcgctatggattccgactttgagtttgcgctcgaaggtgtgaacgacttt
ggggaagaattcgacggcgcgtggggttttgacgatgcgaagaagaatatgctcaagggg
ggcgagaataaggttatggttgatttggatgctatcattgagaggaggagggcgaagaag
gaggccaaggctggaaagaagaaggaggaggagaaggaggaggaagtggaagaagaggat
gaggagattgcggaagtggaccttgacgacgatgatgatgaggtgttggcggaggatggc
tttggtatgggcgtggggtctgatgtcgaggaggaggaggaggagccaaaagacggttcc
gattctgaggatgaggacgaggagaaggatggcgaggccgacgacgacgacgatgctgct
tcggacaatgactcggtcgcgacacccatcaatcaccccgacgacgagaaagactccgaa
tccgaagacgatgaagaagatgccgaggaggctgctaagaggaaagagttctttgccgat
gaggacgacgtcaagcaagaaaagggcgtccacagttccttccttgagatgtcgctttcc
cgtcctattctcaagggtctgaactcggtcggattcacaaaacccacgccaattcagtcc
aagacaataccaatcgcgctcatgggcaaggatgttgtcggtggtgccgtgactggttcc
ggtaaaacgggtgccttcctcgtacccattctcgagcgtctcctctaccggtcaaagaag
gttgcgacaaccagagtcgtcattttggcgccaacgcgtgaattggccattcagtgccac
gctgtcggtgtcaagctggcatcgcacacagacatcaagttctgtctggctgttggtggt
cttagtttgaaggttcaagaacaggagctgcgcctgagacctgatgtggtcatcgccacc
cctggtcgtttcattgatcatatgcgcaactctgccagctttgctgttgagactgtcgag
attctggtgcttgatgaggccgacagaatgctcgaagacgggttcgcggatgaactgaac
gaaattctcaccaccctccccaagtcgaggcaaacgatgctcttctcggccaccatgaca
tcgtccgttgacaggctcattcgtgccggtctcaacaagcctgtccgcatccaggttgat
tctcaaaagaagactgccagcaacctcagacaagagtttgtgcggttgcggccgggccgt
gagaagaagcgtatgggatacctggtacacatttgcaagaccctttacacagagcgcgtc
attattttcttcaggcaaaagaagattgcgcatgagactcgcatcatctttggtctttta
ggcatgagctgcgcagagcttcacggcagcatgaaccaagcacagcgtattgctagtgtt
gaagcattcagagacggcaaggtcaatttccttttagctacagatttggcctctcgtggt
ttggatatcaagggtgttgacactgtcatcaactacgaggcccctcaaaacttggaaatc
tacatccatcgtatcggtcgtactgcccgtgcgggccgtagcggcgttgccctcacgctg
gcagccgagcccgaccgcaaggttgtcaaggcggctgtcagggccggtaaggctcagggc
gcaaagattaccagcagaatcatcgaggcatctgatgccgacaagtggcaagatcagatt
gacgagatggagggcgagatcaaggagatcatgcaggaagagaaggaggagaagcaactt
caacaagtggagatgcaggtcaagaagggtgagaacatgatcaagtacgaagaggagatc
gcctcgcgacccaagcgtacatggttcgagacccaggatgacaagagagccgccaaactt
gcgggccgcgaagagctcaacggcataagggaacagctcaagaagaagagccaaggcaag
ctgagcaacaaggataagaagaagctcgatgccaagcaagaaatgaaggaaggcaggaca
tggaagaagggcaaggaagagagagctggaaagggggcggtcctgaacctttccaaggtg
aagaagcccaagacgaaggggccggctggcaagaagtcgttcaagaggaggtag
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