Podospora pseudocomata: QC762_706980
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Entry
QC762_706980 CDS
T09797
Symbol
SMC3
Name
(RefSeq) Structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd04111
Cell cycle - yeast
ppsd04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
QC762_706980 (SMC3)
04113 Meiosis - yeast
QC762_706980 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_706980 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppsd00535
]
QC762_706980 (SMC3)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
QC762_706980 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
QC762_706980 (SMC3)
Proteoglycans [BR:
ppsd00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
QC762_706980 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
SbcC_Walker_B
AAA_29
ABC_tran_CTD
ABC_tran
Motif
Other DBs
NCBI-GeneID:
87913451
NCBI-ProteinID:
XP_062739362
LinkDB
All DBs
Position
7:1880509..1885861
Genome browser
AA seq
1200 aa
AA seq
DB search
MHIKQIIIQGFKSYKEQTVIEPFSPKTNVIVGRNGSGKSNFFAAIRFVLSDAYTNMSREE
RQALLHEGSGSAVMSAYVEIIFDNTDKRFSEPGDEVVIRRTIALKKDEYSVDRKVQTRAD
VLKILETAGFAKENPFYIVPQGRIAAITNMKESERLNLLKEIAGTNTYDDRRIQSLKIMA
ETNSKRDKIDETLVYIKERLRELEEEKDELRDFQDKDRERRCLEYAHWHRLQKTNAETLE
QVEEARQGGAGASTKDRAQLRKTEKEIAVLDQKAHELRQALEYLTIERRQLDDDRKDAAR
ARAKAELKTKHLDESRHVREQTRQRQEAELQEVRQKIQQAEAELVRVQPEYEKLKAEEAE
IKTQRDSVAAGRKRLLVKQTRSSQFKNKAERDAYLRNEIQEATSSLGLQKANAMDAREQV
QQVESSIAQLEQSIQHIRARMESYGGNRTALFEKLTKAQEAREQLEEERKRLRREDDRLS
SQISSTRMDRDQAESHLSHAMDSATSKGLATIRRLKQEKNIPGAYGTLAELMSVPMDAYK
LPVEQVAGNSLFHYIVDNQATATMLSDHLYKNYGGRLTFVPLEQIRPRQVKMPRASDAQP
LISKIEFDPLYEKAFQQVFGRTIICPSLAIASQYSRSHGLDAITPEGDTTNKRGAMTGGY
VDARRSRLDAVQKVSKLREIYEAQLADAAKIRKEIEVIDQKVTAARGEETKIQQQMRRFD
QDYDPLKGELQSKNSQLERQRAHYESALSHLAEVEKNMKELDDSILASQNELAQDFKKTL
SASEEQELERLGNELSALQKEFKAISTKRIDLEGRKKSLEQELNTHLRPQEDQLRSQAFE
ATTAGGTESFKDAQKELKKAQKLAAEAEASLKENEQQTEQTSSELTQVEAQKAQKEQELQ
ELQRRIEQYQKKMEKAIQTRARLISQAAEYAKNIRDLGILPEEAFGKYEKMKSEQIETRL
AKVNQALKKYKHINKKAFDQYNSFTTQRDNLLKRRKELDTSQASIETLIEHLDQEKDEAI
ERTFKQVSKEFSTIFEKLVPAGHGRLVIQRKADRAKNRAANNDSDEEGVSGVESYTGVGI
SVSFNSKVMDEQQKIQQLSGGQKSLCALCLIFALQAAESSPFVIFDEVDANLDAQYRTAV
ASLLQSISEEQKTQFICTTFRPEIVHVADKCYGVTFHNKTSTIDCVRTEDALNFVDGQKK
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcaaacagattattatccagggcttcaagagctacaaggaacaaaccgtcatc
gaacctttctctccaaagaccaatgtcattgtcgggcgcaatggctctggcaagagtaac
ttcttcgctgcgatccgattcgttctcagcgatgcctacaccaacatgagccgcgaagag
cggcaggctctgctgcacgaaggatcaggctctgcggtcatgtcggcctatgtcgagatc
atcttcgacaacaccgacaagcgtttcagcgaaccgggcgatgaggtggtgattcggcgg
acgattgccctcaagaaggacgaatattccgtcgatcgaaaggtccagacccgcgcagat
gtgttgaagattctcgagacggccggtttcgccaaggaaaacccattctacattgtaccc
cagggtcgcatcgcggccatcaccaacatgaaggagtccgagaggctcaaccttctaaag
gaaatagcgggtaccaacacctatgacgaccggaggatacagtcgctcaagatcatggcc
gaaaccaacagcaagcgcgacaagattgacgagactctggtgtacataaaggaacgactt
agggagttggaggaagaaaaggacgagcttcgcgactttcaggacaaggacagggaacgc
aggtgtctcgagtatgcccactggcaccgtctgcaaaagaccaatgctgagactcttgag
caagtggaggaagccaggcaagggggggcaggggcctctacgaaagatcgtgcccaactc
cgaaagacggagaaggagattgctgttctggaccagaaggcccacgaactcagacaagct
ctggagtacctcactatcgaacggcgccaactggatgacgaccgcaaggacgcggctagg
gcgcgtgccaaggccgagctgaagaccaagcatttggacgagagcaggcatgtccgcgaa
caaacacgacaaaggcaggaagccgagcttcaggaggtcaggcaaaagattcaacaagcc
gaagcagagctcgtcagagtgcagcccgaatacgagaagctgaaggctgaagaggctgag
atcaagactcaaagagactctgttgctgctgggcgaaaacgacttcttgtcaaacagacc
agaagcagtcagttcaagaacaaggcggaacgcgatgcatatcttcgcaatgaaatccag
gaggcgacatcatctctcggtctccaaaaagcgaacgccatggacgcgagggagcaagtt
cagcaagtggaaagttcaattgcgcagcttgaacagtccattcagcatatcagggccaga
atggaaagctatggaggcaaccgcactgctctttttgagaagttgaccaaggcgcaggag
gccagggaacagcttgaagaggaacgaaagcggcttcgtcgtgaggatgaccggctcagc
tcgcagatcagcagcaccaggatggacagagaccaagcagaatcgcatctctcacatgct
atggattcggcgacgtccaagggtcttgccactattcgaaggcttaagcaggagaagaat
attcccggcgcttacgggacgctggcagagttgatgagtgtgccgatggatgcctacaag
ctgccagtggaacaggtcgcaggaaacagcctgtttcactacatcgtggataaccaggcc
acagcgacgatgctgtctgatcacctgtataagaattacggcggtagacttacctttgtg
cccctcgaacagattcgcccaaggcaggttaagatgccgagggcgtccgacgcccagccc
ctcatcagcaagattgagttcgacccattatatgagaaagcattccagcaagtatttggc
cggaccatcatctgcccaagtctggctatcgcttctcagtactcacgctcacacggcctt
gacgccatcactcccgaaggcgacacaaccaacaagaggggcgcaatgacgggtggttat
gtcgatgccaggagatcacgtctggacgcggttcaaaaggtcagcaaactgcgtgagatc
tacgaggcacagttggcagatgctgccaaaatcagaaaggagatcgaggtgatagatcag
aaggtcacggcagcaaggggcgaggaaaccaagattcagcaacaaatgcgccgcttcgac
caggattatgaccctctcaagggcgagcttcagagcaaaaattcgcagcttgaacgccag
cgggctcattacgagtctgcattgtcacacttggccgaagtggagaagaacatgaaggag
ttggacgattccattctggcatcgcaaaacgaattggcccaggactttaagaagaccctg
tcagcgagtgaggagcaagagctcgagcgcctaggcaatgagttgagcgctctgcagaag
gagttcaaggcgatcagcacaaagcggattgatcttgaaggtcgcaaaaagtctcttgag
caggagctgaacacccatctccgacctcaggaagatcaacttcgaagccaggctttcgag
gccacgacggcaggtggtactgaaagcttcaaagacgctcagaaggaactcaagaaggct
caaaagctggcggcggaggcggaggcgtctttgaaggagaacgagcagcagacggagcag
acaagcagtgagctgacccaggtagaagctcaaaaggcgcaaaaggaacaggagctccag
gaactgcaaaggcgtattgagcaataccagaagaagatggagaaggccattcagacgagg
gctcgcctcatcagccaggctgctgagtatgccaagaatattagagatttgggtattctg
cctgaggaagcttttggcaagtatgagaagatgaaatccgagcagatcgaaaccagactt
gccaaggtcaaccaagccctcaagaagtacaagcacatcaacaagaaggcctttgatcag
tacaacagctttaccacacagcgagacaacttgctgaagcgccggaaagaacttgatacc
tcgcaggcctctattgagacgctcattgagcatcttgatcaggagaaggacgaggccatt
gagcgtaccttcaagcaggtgtcgaaggaattctccaccatctttgagaagcttgttcca
gctggtcacggacgtcttgtcattcaacgcaaggcggaccgtgccaagaacagagctgcg
aataatgactcggatgaggagggtgtcagtggggttgagagctatactggtgttggcatc
agtgtgtcttttaactcgaaggtcatggacgagcagcagaagattcagcagctcagtggt
ggtcagaagagtttgtgcgctctatgcttgattttcgccctccaagcggcagagtccagc
ccgtttgtcatctttgacgaggtcgacgccaacctcgacgcacagtaccgtacggcagtg
gccagcctcttgcagtcgatttcggaggagcaaaagacgcagtttatctgcacgactttc
aggccggagattgtgcatgttgctgacaagtgctacggtgtgacgtttcacaacaagacg
agcacgattgactgtgtgaggacggaggatgcgctcaactttgttgatgggcagaagaag
tag
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integrated database retrieval system
