Podospora pseudocomata: QC762_709250
Help
Entry
QC762_709250 CDS
T09797
Symbol
YKU80
Name
(RefSeq) ATP-dependent DNA helicase yku80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
QC762_709250 (YKU80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_709250 (YKU80)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
QC762_709250 (YKU80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
ZMYND11_CC
Ku_C
Motif
Other DBs
NCBI-GeneID:
87913680
NCBI-ProteinID:
XP_062739616
LinkDB
All DBs
Position
7:complement(2693590..2696580)
Genome browser
AA seq
725 aa
AA seq
DB search
MADKESTVYVVDLGESMADCHNGRVESDLDFGMRYVWDKISDTVAASRKTWTIGFVGFNT
DETENELADKDKLEGYDNISVLQPIGPMSMTELRELRSKVQPSRSYGADPISAAVVALKM
LEKYNPKHKIKRRVILVTNGESNIDDEELDHIAAVFNEFKVELIVIGIDFDDADYGFKEE
DKSTNKKNNEKALQQLVEKCNDGVFGTMQQAVDELSIPRIKPVRPFKAYDGPLTLGDPDK
YPSAISFHVERYYKTKRASAPSASTVVVSNNNGFSQSQTYKDEDGDSEMGGAEFSGVKQM
RTYKVNDPDAPGGKRDVDFEELAKGYQYGRTVVPFGESDLSITKYSTKKSFTIIGFVPFD
SYNPFINMGETGLIVPQKMNEEAELGLSAFIHALYEADSYAVARYVQKDEAAVQILLLKP
NTGLEDEFECLYDVPLPFAEDIRSYQFPPLDKVLTVSGSVLKEHRLLPNDDLKDAVSDFV
DAMDLSNYDVDEDGKPVDYAPVDEVYNPIIHRMNQAIRARAVDPDSPIGQPAEILLRYSK
PPKKLLEKAKHEIGNLIDAAELKKVPEKAKGRFGKKDAVKPISGLDIDSLLGGQPKRAAI
SSENAIPEFKQMLAAAEDDETIEKAVKQMGEIVRKFIKDSFADVFYSRAAENLGVMREEL
LGFEMPMLYNKLLRALKKSLLSGELDGDRREMWYKHIVGGGLGLITKEELDVSDVTEEEA
KAFAK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaatccacagtctacgtcgtcgacctaggcgagtcaatggctgattgc
cataacggccgcgtcgaatctgatctcgattttggtatgcgctatgtttgggacaagatt
tcagataccgtcgcggcaagcaggaagacgtggaccataggtttcgttggcttcaacacc
gatgagacagagaacgaactcgcggataaagataagctcgagggctacgataacatctct
gtgttgcagcccatcggccccatgagcatgacggagctcagagaattgcgctccaaggtc
cagccgtccaggagctatggtgccgatccgatttctgctgctgtggtggcactaaagatg
cttgagaagtacaatccaaagcacaagatcaagcggagggtaatccttgtcaccaatggc
gagtcgaacattgatgatgaagagctggaccacatcgctgcggtattcaacgagttcaaa
gttgaactgattgtgattggtatcgattttgacgacgctgactacggctttaaggaagaa
gacaagtctaccaacaagaaaaacaacgaaaaggcacttcagcaactggtagaaaagtgc
aatgacggcgtgttcggcaccatgcaacaggccgtggatgagctgtcaatacctcggatc
aagccagtacgaccattcaaggcctatgatgggcctttgaccctcggagacccagacaaa
tatccaagcgccatcagcttccacgtggagcgttactacaagaccaaacgcgcttctgcg
ccatcagcaagcaccgtcgtggtcagcaacaataacggattcagtcaatcacagacctac
aaagacgaagatggggattctgagatgggcggagccgagttctccggtgtcaagcaaatg
cgcacctacaaggtcaacgatcccgacgccccaggaggcaagagagacgttgattttgaa
gagcttgcaaagggctaccagtatggccgcacggtggttccgtttggcgagtccgacctg
tccatcacaaagtactcgaccaaaaagtcattcaccatcatcgggttcgtcccctttgac
agttacaatccctttatcaacatgggcgaaacgggtctgattgtgccccagaaaatgaac
gaggaggccgaattgggactttcggcattcattcatgctctctacgaggctgactcgtat
gctgttgccagatatgtgcaaaaggatgaggctgcagttcagattcttcttctcaagccc
aacactggtcttgaggatgagtttgagtgcctttacgatgtacctctgccctttgccgag
gatatccgaagttaccaattcccgcccttggacaaggtgcttaccgtgtctgggagtgtg
ctcaaggagcatcggctgttgccaaacgatgatttgaaggacgctgtgagcgactttgtt
gacgcaatggatttgtcaaactatgatgttgatgaggatggaaaaccagtagactatgca
cccgtagacgaggtgtacaacccaatcatccaccggatgaaccaggccatccgagcccgg
gctgttgacccagactcgcccatcgggcaaccagccgagattctgttgaggtactccaag
cctccaaagaagctcctcgagaaagccaagcacgaaatcggcaacctgatcgatgccgca
gaactcaagaaggttcccgaaaaggccaaaggtcgcttcggcaagaaagacgccgtcaag
cccatctccggcctcgacattgactccctccttggcggtcaacccaaacgcgctgccatc
tcttcagaaaacgctattcccgagttcaagcagatgctcgccgcagctgaggacgacgag
acgatcgagaaagctgtgaagcaaatgggcgagattgttcggaagttcattaaggacagc
tttgctgatgtgttttactcgcgggctgctgagaatttgggagttatgagggaggagttg
cttgggttcgagatgccgatgctgtacaacaagcttctgagagcgctgaagaagagcttg
ctgagtggtgagctggatggtgatcggagggagatgtggtataagcatattgtgggtggt
ggactgggactcatcacgaaggaggagctggatgtttcagatgtgaccgaggaggaggcc
aaggcttttgcgaagtga
DBGET
integrated database retrieval system
