Podospora pseudocomata: QC762_709280
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Entry
QC762_709280 CDS
T09797
Symbol
TOP3
Name
(RefSeq) DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03440
Homologous recombination
ppsd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QC762_709280 (TOP3)
03460 Fanconi anemia pathway
QC762_709280 (TOP3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppsd03032
]
QC762_709280 (TOP3)
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_709280 (TOP3)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QC762_709280 (TOP3)
DNA replication proteins [BR:
ppsd03032
]
Eukaryotic type
DNA Topoisomerases
QC762_709280 (TOP3)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
QC762_709280 (TOP3)
FA (Fanconi anemia) pathway
QC762_709280 (TOP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
87913684
NCBI-ProteinID:
XP_062739620
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All DBs
Position
7:2702288..2705451
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AA seq
657 aa
AA seq
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MKGTKRSLYVQVGVLSRLSSHRDSVVRANHIYNLKKSRFGVSSNIQSHVANCSSSLFFFF
FFSTHSPSLAKSTAKTTKTTSTKTTKSSPTSSTKISKVSTKTSSAKTEQPIIDTKPNNIM
TRVLCVAEKPSIAKAVAQHLSGGQYQTANTSDKYTKNYSFTFNFGPGLGDSNVTMTAVRG
HLTTAEFPPTYKSWSHPPPDSLFDAPITTVTTPDCKAIARNIETLARSSSVLIVWTDCDR
EGEHIGSEIRDAALKGNRNIQVRRARFSNVERGHILSAARRLVALDQRQVDAVAARIELD
LRIGFAFTRFLTNNLRGLGGPMGELMISYGSCQFPTLGFVVDRYFRVKNFVPEAFWSIKL
VHEREGMKVSFGWARNRLFDRAAVTILYERCLRAREAVVKKVQEKPTKKWKPLPLTTVEL
QKMATRFLRMTGQQAMTVAEKLYNKGFISYPRTETDRFDKGMNLRGLVEKQFPDGRWGAF
ARELIEGGRFNQPRQGKNDDKAHPPIHPITYAAPTVLDEQERKVYEFVVRRFLACCSDDA
KGMATDVEVGYGEEMFAAHGVIVLERNYLDVYPYENWTGTAMLPKFEVGERFEPTEAMMT
EGKTSPPSYLTEADLIALMDANGIGTDATMAEHIEKIQERQYVVTVPRGRSWWCRGR
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcacgaagaggagcttatacgtgcaggttggagtcttgagcaggctttcctct
catcgcgactcggttgtgagagcaaatcatatctacaatttgaagaagtctagatttgga
gtctcatccaacattcaatctcatgttgccaattgcagctcttctctcttcttcttcttc
ttcttctccactcactctccttcactagcaaagtccacggcaaaaactacgaaaacaact
tcaaccaaaacaaccaaatcgtcaccaacttcatcgactaagatatcgaaggtttccacc
aagacctcatcagcaaaaactgaacaaccaatcatcgacacaaaacccaacaacatcatg
acacgcgtcctctgcgtggctgaaaagccctccatcgccaaagcagtcgcccaacacctc
tccggaggccaatatcaaactgcgaacacctcagacaaatacaccaaaaactactccttc
accttcaacttcggccccggcctgggcgactccaacgtaaccatgaccgccgtccgcggc
cacctcaccaccgccgaattcccccccacctacaaatcctggtcccacccaccccccgac
tccctcttcgacgcccccatcaccaccgtcacaacccccgactgcaaagccatagcccgc
aacatcgaaaccctcgcccggtcctcctccgtcctcatcgtctggaccgactgcgaccgc
gagggggagcacatcggctccgaaatccgcgacgccgcgctcaaggggaacaggaacatc
caggtcaggcgagcgcggttttcaaacgtggagagggggcacatactcagcgcggcgagg
aggttggtggcgctggatcagcggcaggttgatgccgtggcggcgaggattgagctggat
ttgaggatcgggtttgctttcacaaggttcttgacgaataacctgcgggggttggggggt
ccgatgggggagttgatgatcagttatgggtcttgtcagtttcccactctggggttcgtc
gtcgatcggtactttcgggtcaagaattttgttcccgaggcgttttggagtatcaagctt
gttcacgagagggaggggatgaaggtgagctttggctgggcgcggaatcgactgtttgat
cgggcggcggtgacgattctgtatgaacgctgcctgagggcgagggaggcggtggtgaaa
aaggttcaggagaagcccaccaaaaagtggaagcctctcccgcttacgacggtggaatta
caaaaaatggcgacgaggtttttgaggatgacgggtcagcaggctatgacggtggcggag
aagctgtacaacaaggggtttatctcttatccgaggacagagacggacaggtttgacaag
gggatgaacctgagggggttggtcgagaagcagtttcctgatgggaggtggggggctttc
gcgagggagttgatcgagggggggaggttcaaccagccgaggcaggggaagaatgatgat
aaggctcatccgcctatccaccctatcacctacgcggcgccgacggtgctggatgagcag
gagaggaaggtgtatgagtttgtggtgaggaggtttttggcttgttgctcggatgatgcc
aaggggatggcgacggatgtggaggtggggtatggggaggagatgtttgctgcgcatggg
gttattgtgctggagaggaattatctggatgtgtacccctacgaaaactggacggggacg
gccatgttgcccaagtttgaggtgggggagaggtttgagccgaccgaggccatgatgacg
gaggggaagacgagcccgccgagttacttgaccgaggcggatctaattgcgttgatggat
gcgaatgggattgggacggatgccacgatggcggagcacattgagaagattcaggagagg
caatatgtggttacggtgccgagggggaggagctggtggtgccgaggaagataa
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