KEGG   Podospora pseudocomata: QC762_711070
Entry
QC762_711070      CDS       T09797                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
ppsd  Podospora pseudocomata
Pathway
ppsd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ppsd00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    QC762_711070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsd03019]
    QC762_711070
   03036 Chromosome and associated proteins [BR:ppsd03036]
    QC762_711070
Messenger RNA biogenesis [BR:ppsd03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     QC762_711070
Chromosome and associated proteins [BR:ppsd03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     QC762_711070
    COMPASS/SET1 complex (yeast)
     QC762_711070
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd PAC11 WD40_Gbeta Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_Vps41
Other DBs
NCBI-GeneID: 87913864
NCBI-ProteinID: XP_062739811
UniProt: A0ABR0G519
LinkDB
Position
7:3329809..3331350
AA seq 372 aa
MAPVPMDLDDASPALRGLGGVNGPPTAPVTEVIANFRPTKLFSREDIEDNKSNPYILSID
FDDPGELCMTSESDRTIQIYNVKEGRHDKMLISKKYGVKLAKFTHTSSSVIYASTRENDA
IRYLATHDSSFIRYFDGHEGAVTCLAMHPGTDNFISCSLDNTVRLWNTQTKNWTGTLYLN
TPYLSAWDPSGQVFAVASPSSGSILLYDYRNYHKAPFSTFDLVKARGPTDPEMAFRGWTK
LEFSNDGKHILLGSRGNGHFLLDSFDGSLKAFLRKPNGGTRRLAAGENDGGHVESSGECC
FTPDGRYVLSGGKSDLLVWDTLMTPDSKQVLEPAHILEEKREAAVVAYNPRYNMIATADQ
ELLFWLPDPPNS
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggcgcccgtaccgatggacctcgacgacgcgtctcctgccttgcggggtctaggtggt
gtgaatggccctcccactgcaccagtcaccgaggtgattgcaaacttcaggccaaccaag
ctgttcagtcgtgaagacatcgaggacaacaagtcgaatccttacattctctcgatcgat
ttcgacgacccgggtgagctttgcatgacctctgagagcgataggacgattcagatctac
aatgtcaaagagggtcgacatgacaagatgctcatcagcaagaagtatggtgtgaagctt
gccaagttcacccacacaagttcaagtgtcatttacgccagtactcgcgaaaatgacgcg
atcagatatctcgcaacccacgacagctccttcatccgctactttgacggccacgaaggc
gccgtgacctgtctcgccatgcacccgggcaccgacaactttatctcctgcagccttgac
aacacggttaggttatggaacacccaaaccaagaactggactggtacactctatctcaac
accccctacctgtcggcgtgggacccgtcgggccaggtgttcgcggttgctagccctagt
agcggaagcattctcctctacgactatcgcaactaccataaagcgccgttctcgacgttc
gacctcgtcaaagccagagggcccaccgatccagaaatggcttttaggggatggacgaag
ctggagttctccaacgacgggaagcacatccttcttgggtcgcgaggcaacggccatttc
ctgctggactcgtttgacggcagcctcaaagccttccttaggaagcccaacggtggtaca
agacggcttgccgccggcgagaacgacggcggacacgtggaaagcagcggcgagtgctgc
ttcacccctgacggtcgctatgtcttgagcggtggaaaatcagacttgttggtctgggac
acgctcatgacaccagactcgaagcaagttttagagccggcgcatattttggaagagaag
agagaggcagccgtggtggcgtacaacccgcggtacaacatgattgcgacggcagaccag
gagctgctgttttggcttccagacccccccaattcgtag

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