Podospora pseudocomata: QC762_711180
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Entry
QC762_711180 CDS
T09797
Name
(RefSeq) hypothetical protein
KO
K12874
intron-binding protein aquarius
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC762_711180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_711180
Spliceosome [BR:
ppsd03041
]
Complex B
Other components
Prp19-related factors
QC762_711180
Complex C
QC762_711180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
Aquarius_N_3rd
AAA_12
AAA_11
AAA_30
ResIII
AAA_19
AAA_16
AAA
Viral_helicase1
UvrD_C_2
DnaB_C
AAA_22
DEAD
SLFN-g3_helicase
nSTAND3
NB-ARC
RNA_helicase
ATPase_2
UvrD-helicase
RecA
Motif
Other DBs
NCBI-GeneID:
87913875
NCBI-ProteinID:
XP_062739823
LinkDB
All DBs
Position
7:complement(3367505..3372268)
Genome browser
AA seq
1451 aa
AA seq
DB search
MPPAKRVKSSANSGSNAASGRPTVEDLEGQSEFATLARQHWLPRKPAEVKVNNDVLKREI
WDTLEKENFPLKSLLVLEGLQALESYLWPGYGEDSSNFHVLLIILIVNAKRRERLDTWDI
FSDRPADFSDLFRRALSLTVDSSLSWVIKTHVLLFIIHAFSSLDCTIVRKECAPLVSISI
WHNISTDDKRDAILDSNTQWRKAWRASAKRYDAADDATKARLRFERSWLYTSVLNFLNLL
YTDNAKPDQVLYCERFVEFLTDLQSQLPTRRYVNTLLQDLHVLPALVLSPVYNDEANGLL
RDLCRLFSHYTYFTIDEQTGAQLSKTEAYDRHCGDLAKLQRTALKHFKDKLTVLALSNYG
AIDKKSELEGLLTVLADDEIESLCKLLGLRTAYPDSVQVPIGRRFLLEVLLSQFERRKTF
QEVASELSLLPTEESLFEVGLGRTEHYDGSHPLALPKLNLQYLSVGDFLWRSMILYRCEA
FYAIRQDIESVLSRLKPEAKRSGETVFSGFSKMALKITKPTILEAVPPLVGDDKPSTVRA
EVTIDLRKLPQHVRREWESLRPDDVLFLLAVDASKPKLATNGGASVTEAEKLGLVAVRAA
EVIQVLDDRGRAIRDAQAYFDGHNRSDIRRLQLRLDAKAFKDDTEGKQDVYEGINLLVRR
SGRENNFKPVLESIQDLTLSDVPLAPWLHEVFLGYGDPAGANYKQLANRLRKVNFRDTFL
DWQHLVESLPGKIVEPDDDVSGSFGPPYVLETVEKPAEEAPSKPSKKRRRDAEPALIAEI
ETLKVSTYKPPNNGPYPVDAPKLNSVRFTPTQIEAIISGTQPGLTVIVGPPGTGKTDVAT
QIINNIYHNFPEQKTLLIAHSNQALNQLFAKIVALDIDERHLLRLGHGEEELETEGSFSK
HGRVESFLENRQRFLYEVNRLAASIGAPGAHGSSAETAGYFNSVYIEPAWAKFNEIIKVE
DATPKDIVTVFPFHGYFADAPQPLFPPGADRETVLEIANGCYRHISKIFSELADVLPFEI
LRRDKDKANYLLTNEARIVAMTSTHAAMKRGEIAALGFQYDNVIMEEAAQITEIGNFIPL
ALQKPKDGQLALQRVVLCGDHYQNSPVIQGLAFRHYANLEQSLFSRLVRLGVPTINLDQQ
GRARPSISSLYKWRYPQLGDLPHTRTEKEFTTANAGFKYDYQFINVPDYKGKGETEPTPH
FIQNLGEAEYAVAIYQYMRLLGYPASKISILATYAGQKALIRDVLAHRCAKNPIFGLPRI
VTTVDKYQGEQNDYIILSLTRTSRVGYLRDIRRLTVALSRARLGLYILGRREVFEACYEL
RDAFELLLKRPDQLTLVTGELWPSERPLVVEQQEGGDGSADNIAVATAVLGEAAMQGVEH
LGQYVYEMTKTKVEELKLLPQVTVPSVDVEIRDVLEDTGLEDEGAAGAGGEEEEEEEEEG
RKVEGFEAEED
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccgccaaaagagtcaagagcagcgccaattccggatcgaacgctgcgtcgggt
cgcccaacagtcgaggacctggagggccagagcgagtttgcgacacttgcacggcagcac
tggctgccaaggaaaccagcggaggtcaaggtcaacaatgatgtcttgaagagagagatc
tgggacactctggagaaggagaacttccccctcaaatcacttttggtccttgagggcttg
caggcattggagagctacttgtggcctgggtatggcgaggactcgtccaactttcatgtt
cttctcattatcttgatagtgaacgcgaagcggagggaaaggctagacacttgggacata
tttagtgatcgccccgctgacttctccgacctctttcgacgtgcgctatccctgaccgtg
gacagctctctttcgtgggtcatcaagacccatgtgcttcttttcatcattcatgctttt
tcgagtctcgactgtaccattgtacgaaaagaatgcgcgcctctagtttccatctccata
tggcataatatttccacagacgacaagcgggatgccatacttgattccaacacacaatgg
aggaaggcctggagggcatctgcaaagcgatatgacgcggctgatgatgctaccaaagcc
cgtttacgttttgagcggtcctggttgtatacctctgtcctcaacttcctgaacctcctt
tataccgacaacgccaagccagaccaagttttgtattgcgagcgtttcgtcgagttcctg
accgatctgcaaagtcaacttccaaccaggcgctatgtcaacacactcttgcaggatctt
cacgtcttgccagctctggttctctcaccagtctataacgatgaggccaacggcttgcta
cgagatctgtgcaggttattttcacactacacatatttcacaatcgatgagcagacgggt
gctcagctcagcaagacggaggcatatgacagacattgtggtgatcttgcaaagcttcag
cgaactgcgctcaaacatttcaaggataagctgacggtgttggccctgtccaactatggc
gccatcgacaagaagagcgagctcgagggccttcttacggtattggccgatgacgagatt
gagtcgctttgcaagctcctaggtttgcgcactgcgtatccagactctgtccaggtaccc
atagggagaaggttcctcctagaagtcttgctgtcgcagttcgagcggagaaagactttc
caggaagtggcaagtgagttgagcctcttaccaaccgaagagtccctctttgaggtcggc
ctcgggaggactgagcattacgatgggtctcatccccttgcgctcccaaaactgaatctg
caatatctttccgtgggcgatttcttgtggcgatcaatgattttgtatcggtgcgaggcc
ttctatgcgatccgtcaggatattgaaagtgttctttccaggctaaaaccggaagcgaaa
cgctcaggcgagacggtgttctcaggtttctccaagatggccttgaagatcaccaagcct
actattctggaagctgtgcctcctttggttggtgatgataaaccatcaaccgtgcgagca
gaggttacaattgacctgagaaagcttccacaacatgtccggcgtgagtgggaatcgctg
cgccctgatgatgtgctgttccttctggcggtggacgcttcaaaacctaagctcgccacg
aacggcggggcatcagttacggaggcagaaaagcttgggttggtggctgtccgcgcggct
gaggtcatccaggtgcttgatgacagagggcgggcaatccgcgacgctcaggcgtacttt
gatggtcacaatcgcagcgacatccggagacttcagcttcgccttgacgctaaggccttc
aaggacgacactgagggtaagcaggatgtgtacgaggggatcaacctgcttgtccgaaga
agcggccgagaaaacaacttcaagccagtgcttgagtctattcaggatctcacactgtct
gatgtccctcttgctccttggttgcacgaggtattcttgggctatggtgatccggccggt
gccaactacaaacagttggcaaaccggctgagaaaagtcaacttccgtgacaccttcctg
gactggcagcatcttgtcgaaagcttgccaggcaagattgtcgaaccagacgacgatgtc
tctggaagctttggcccgccatatgtcctcgagacagttgagaagccagcggaagaggct
ccatcaaagccttccaagaaacgaagacgggatgctgagcctgccctcatcgcggagatt
gagaccctcaaagtctcgacatacaaaccaccaaataatggtccctatcctgttgatgct
ccaaaactcaacagtgttcgcttcacgcctacccaaattgaggcgatcatctcggggaca
cagccaggcctgacagtcattgttggccctcctggtactggcaagacagacgttgccacg
cagatcatcaacaacatctaccacaactttccagaacagaagacgcttctcatagctcac
agcaatcaagctctgaaccagctgtttgccaagatcgtggctttggatattgacgaacgt
catctccttcgtctgggtcatggcgaggaagagcttgagaccgagggcagtttcagtaag
cacggacgggtagaatctttcctggagaaccgacaacgcttcttgtatgaagtcaaccgt
ctcgctgcgagcattggcgcaccaggtgcacacggaagctctgcggaaacggctggttat
ttcaactccgtctacattgaacctgcgtgggccaagttcaatgagattatcaaggttgag
gatgctaccccaaaagatatcgtcacagtgttcccattccatgggtattttgcagatgcc
cctcagccgctgttcccgcctggggcagatcgtgagactgtcctagaaattgccaatggg
tgctatcggcacatttccaagattttctctgaactcgcagacgttctgccttttgagatt
ctgcgcagggacaaagacaaagccaactatcttcttaccaacgaggcacggatcgttgcc
atgacttcgactcacgctgccatgaagcggggcgagatcgcggcgcttggtttccagtac
gacaatgtcatcatggaagaggccgctcaaatcaccgagattgggaacttcatcccgctt
gctctgcagaagccaaaagatggccaactggcgcttcaacgagttgtcctgtgtggtgac
cactatcaaaactcacctgtcatccagggtctcgctttccgccattacgcgaacctagag
cagtccctcttttcccgcttggtgcgtctcggcgtcccaacgatcaatcttgaccagcaa
ggccgcgcccgcccatctatttcgagtttgtacaaatggcggtatccccagctcggtgac
cttccgcatacccggacagagaaggagttcaccaccgccaacgccggcttcaagtatgat
tatcagttcatcaatgtccctgactacaagggcaagggcgagacagagcccacgccgcat
ttcatccagaatctgggcgaggccgagtatgcggtggccatctaccagtacatgcgtctg
ctaggctacccagcctccaagattagcatactggccacgtatgccggtcagaaagcgttg
atcagggatgtgttggcgcatcggtgtgccaagaatcccatctttggtctgccgaggatc
gtgacgacggtggataagtatcagggagagcagaatgattatatcatcctctcgttgacc
cgcacgtcccgagttggttacctgagagatatccgccgcctgacggtggctctttctcgc
gcgcggttgggattgtacattctcggtcgccgtgaggttttcgaggcgtgctatgaactc
agggacgctttcgagctgcttctcaaacggccggaccagttgacgctggtgactggggag
ttgtggccttcggagcggccactggttgttgaacagcaagagggaggagatggcagcgca
gacaacatcgcggtcgcaacggcggtgctgggcgaggctgctatgcaaggggtcgagcac
ttgggacagtatgtctatgagatgaccaagaccaaggttgaggagctgaagctcttgcct
caggttactgttccttctgttgatgtagagataagggatgtactagaggatacaggtctg
gaggatgagggggcagctggtgccggaggtgaggaggaggaggaggaagaggaggagggg
aggaaagtggagggttttgaggctgaagaggattga
DBGET
integrated database retrieval system
