Podospora pseudocomata: QC762_711230
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Entry
QC762_711230 CDS
T09797
Symbol
eaf1
Name
(RefSeq) RNA polymerase II transcription elongation factor SpEAF
KO
K11397
chromatin modification-related protein VID21
Organism
ppsd
Podospora pseudocomata
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsd03036
]
QC762_711230 (eaf1)
Chromosome and associated proteins [BR:
ppsd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NuA4 complex
QC762_711230 (eaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSA
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
87913880
NCBI-ProteinID:
XP_062739828
LinkDB
All DBs
Position
7:complement(3383290..3389270)
Genome browser
AA seq
1545 aa
AA seq
DB search
MTEVGPADRAKLLRSKREGLSSIVQSRKRKLRELYAVATDEDGIPNLDLSNLDAAPTAPA
ETSFLIDTDFTQGRRLGKLAKFPRRKVLFDARTLPAHSQPATIENVPHSSIKDSRANEPA
ANVANDAQLSTPKSPLTVQDQQVLPQSSTTTTTSTPLPLAAPDNSKAVSLGQNGLHTDLH
EKASSSLPLTTATSNHIATNGTITTPSLAQPDHPSAPASAKPRIITNAVPLEHAPGSMDV
DSVASPKDSGSAPAMADLSRYQDALSSPGSTALSAQTPAVADSANTSPENEGPPYVERAD
ETNGVKAPEDVTAGDRGGERNASNPTSDATSLDESNPAVMSGVEAQLLQESAAAQLAHEG
SSASPQEPEDKALSPAEARSTGKSSAEALAKPVQNAAQVVGQTVMQSTPPLANGLSPTPG
PVSERREASSVAPMDLDVSVPTRPTEVPQRPSALEAVTKATPTPVSRSTPTPVGISKDEN
VAVTQQRATPAREVPTITIEPPAPQATEPPVPEEADNDSEKNLSAPQLKLLANRERDRRR
RSVPTVIFGKPAKKTHKTVDDSVLAINRQRPGYIPSDDYFTPLFIEGFTRTSTWMKPIEK
LLNQAHKTVSTSDQYLSILDHQACKILRRVYHLQQHDKWSLRQPMRCPEPTRPPSHQDVL
LQEMKWMRTDFREERKWKRAVARNLAYACAEWVYSSPEERRALQVNAVVPPKPTAPGQDV
QMTDSGEGGEEPLPELDHSDSPAEHEDEHLEAMVETVAPAMIFALQDDEVVFGLQPSKTA
ELLLENLPMYGSPLQVPKFDLVGPEYDPDAKWKRPAVPLSKFVEGEMVLADKGPPRKRRR
FDYLSDSDKEDGDEVIFGTQPDNNAHSQPENSAVALFNPEMKAVRDRLHAGHQFRPPTEY
PMPSQSFFECRMASQWTFAEDNQLKSLALEYNYNWSLISSVMSTKSLFSSGAERRTPWEC
FERWTNLEGLPTELAKTPYFKQYQLRIDNAQRTILQQNQTAQQQVGPNGAVTPVPRRRPT
TTMRVERRRNQKHLAMIDAMRKLAKRRETAIQKAQQQASQVASRKVNEASRQPIPPAKTP
RDYSIMRHERDQKLAERMAQYTARQAVALGKNLKPQPHAVPGTPAALAAAQAGQMPGANS
LMAAAAAARLNVPAQVAQNRVQARVPMQAPLGAVPPAVQARLNGLGALVPPMAGIPQAQL
QAALQAQQRMPMATPQPDLNLVLQAQTIQQQQQAAIRLAQQQRQAAQQAQQAAAQQAHQQ
VHGHQQQQVGQQQHQPQQGVAQQPQQQPQPQQVGQQPQQHPQVNGTQNSPSPMRSVVNGL
NQGAFMANANAQAMMAAFNGGGLATSPGAGLTMPMLNPRVAGGALNPAVQQRIAELEVHY
RNKSPGLTQQEARNLAMEQVGRIIVQNAQNHQLAQAHQQAAMSAAAGQLGHQPGLNAMTA
TTSPHQYASLLRAQQQAQAAQIQAQQQAQQAQQQAQQQQPHNPQAHQAAAVQQAQAQQVA
QLAAQQAQHQQAQQQQQQQQQQQQQQQAAQHQRQASGSATPAPGK
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggtcggtcccgccgaccgcgcgaagctgctgcgatcaaaacgggagggcttg
agctcaattgtgcagtcgcggaagcgcaagctgcgcgaactatatgctgttgcgaccgac
gaagatggcattccgaacctggacctcagcaacctcgacgcggccccgacagcaccagcc
gaaacatctttcttgattgacactgacttcactcaaggccgacgactgggaaagctcgcc
aagttcccgcgccgaaaagtcctattcgacgcacgaactcttccagctcactcccaacct
gcaactattgagaatgtgccccattcttccatcaaggattcccgggccaatgagcctgcc
gccaacgtagcgaatgatgctcaactcagcaccccgaagtctccgttgacggtgcaggac
caacaggtcctaccacagtcttcgacaacgacgacaacctcgactccgttacccctggcc
gcgcccgataattcgaaagcagtatcgcttggacagaatggcttacatactgacctacat
gagaaagcatcgtcctccttaccgctaaccaccgcgacaagcaaccatatcgccacgaat
ggtaccatcaccacaccctctctggcgcagcctgatcatccatcagcgccagcgtcagcg
aaaccgcgtatcatcacgaatgctgtccctctcgaacatgcccccggatcgatggatgtc
gacagtgttgcgagcccgaaagactcaggttcagccccagcaatggcagacttgtcacgg
taccaagatgctctatcctctcctggctccaccgccttgtcggcacaaactcctgctgtg
gcagattcggcaaacacgagtcccgagaatgaaggaccaccgtatgtggaaagagcagac
gagacgaatggcgtcaaggctccagaggatgttacagcaggagataggggaggcgaacgg
aacgcaagcaatcctacgtcagatgcaacttcgttggacgagtcgaatccggcagtaatg
agtggtgttgaggcccagcttcttcaggagtctgctgcagcacagcttgcacatgagggt
agctcagcgtcacctcaggagccagaagataaagccctgagccctgcagaggcccgttcc
accggcaaatcttccgccgaagcattagcgaaacctgttcaaaatgcggctcaagttgtt
gggcaaactgtgatgcagagcacaccacctcttgcgaatggactatcacccactccggga
cctgtgagcgaaaggcgggaagctagctcagttgcgccgatggacttggatgtttctgtt
ccaacacgaccgacagaagtcccacagcggccctcagctctcgaagcagtcaccaaggct
acacctaccccggtttcaaggtccacgccaacacctgtagggatttcgaaggacgaaaat
gtcgctgtcacacaacaacgggcaaccccagccagggaagttccaaccattaccattgag
cctccagcgccccaggccaccgaacccccggtccccgaggaggcagataatgattcggaa
aagaacctctcagccccgcaactgaagctgctcgcgaatagggaacgcgatcgacggcga
agaagtgtccccacagttattttcggcaagccggcaaagaaaacacacaagacggttgat
gacagtgtgttggcgatcaatcgccagaggcctggatatataccttcggatgactatttc
actccgcttttcattgaagggtttacccgcacatctacctggatgaagcctattgagaaa
cttcttaaccaggcccacaagacagtctccacgtctgaccagtacctgtcgatactcgat
caccaggcgtgcaagattctgagaagggtttaccatctacagcagcatgacaagtggtcc
ctgagacaacctatgaggtgtccagagccgaccaggcccccgtcacaccaggatgttttg
ctccaggaaatgaagtggatgaggacagacttccgagaagagcgcaagtggaaaagggca
gttgctcggaatcttgcgtatgcgtgcgcagaatgggtttactcaagccccgaggaacgc
cgcgcgcttcaggtcaatgctgttgtaccaccaaaaccaacagcaccgggccaggatgtt
caaatgactgattctggtgaaggaggagaagagccacttcccgaattggatcactcggat
tcaccggcggaacatgaggatgagcacttggaggccatggtcgagacggtggcgcccgcc
atgatatttgcgctccaggatgacgaggttgtttttggactgcagcctagtaagacggct
gaactcctgctcgagaaccttcccatgtatggatcacccctccaagtacccaagttcgac
cttgttgggcccgaatatgatccggatgcaaaatggaagagaccagctgtgcccctgagc
aagtttgtcgagggcgagatggtactggccgacaaaggcccaccgcgaaagcgacgtcgc
ttcgactatctttcagacagcgacaaggaagatggcgatgaagttatattcggcacgcag
ccagataacaatgcgcactcgcagccagaaaactcggccgttgcgctattcaaccctgaa
atgaaagctgttcgagatcgtttgcacgcgggtcaccaattccgacccccgaccgagtac
cccatgccttctcagagcttctttgaatgcaggatggcatcgcaatggacctttgcggaa
gacaaccagctcaagtcactagcactcgagtacaactataactggtctctgatttccagc
gtgatgtcgacaaaatccctcttttcctcaggcgctgagcggcggactccttgggaatgc
tttgaacggtggaccaatctggaaggcctgcctactgaattggccaagacgccgtacttt
aagcaatatcagctacgtatagacaatgcccagcggactatcctgcagcagaaccagacg
gcccagcagcaagttgggccaaatggcgcagtcactccggttcctaggcgcaggccgacc
acgacgatgcgggtagaacggcgccgcaaccagaagcatttggccatgattgatgccatg
aggaaactggcgaagaggcgggagacggccatccagaaggctcaacaacaagccagtcaa
gttgccagccgtaaggtgaatgaggcatccaggcagccgattccgccggccaagacgccg
cgtgattatagcataatgaggcatgagcgtgaccagaaacttgctgagaggatggctcaa
tacacagcgcggcaagcagttgccctcggaaagaatctgaaaccacagcctcacgcggta
ccgggcacgcctgctgctcttgccgcggcacaggctgggcaaatgcctggtgccaattct
ctgatggccgccgccgccgctgcccggctgaacgtgccagcccaagtggcccagaacaga
gtgcaagcacgggtcccgatgcaagcacctctcggagcagtgccacctgccgttcaggct
cgtttgaatggtcttggtgcacttgttcctcccatggctggcatccctcaagctcagctt
caagccgctctccaagcacagcagagaatgccaatggcgacaccacagccagatctcaac
ctcgtgctgcaggctcaaaccatccaacagcagcagcaggcggccattcgacttgctcag
caacagcgacaggcggctcaacaggctcaacaggcggcagctcaacaagcccaccaacag
gttcacggccaccagcaacagcaggttgggcagcagcaacatcagcctcaacaaggagtg
gcccagcagcctcagcagcagccacagcctcagcaggttggccagcagcctcaacagcac
ccccaggtcaatggaacccagaattcaccctcacccatgcgcagtgtggtgaacggtcta
aaccaaggagcatttatggccaatgccaacgcccaggccatgatggcagcctttaacgga
ggtggcttggctacttcaccaggcgctgggctgacgatgcccatgctaaaccccagagtg
gcgggtggggctcttaaccctgcagtacagcagcgcatcgctgagttggaggtgcattat
cggaacaagagtccaggcctcacgcaacaggaggccaggaaccttgccatggagcaagtg
ggcaggatcatcgtccagaacgcccagaatcaccagcttgcccaagctcaccagcaggcc
gctatgagcgctgcggctgggcagctgggacaccaaccaggcttgaacgccatgacagca
accacgagcccgcatcaatacgcttcattgctgcgggctcagcagcaggcccaagctgcc
cagatccaagcccagcagcaggctcaacaagcccagcagcaggcccagcaacagcagcca
cataacccgcaggctcaccaagcagcggcagtgcaacaagcacaagcccagcaagttgct
caacttgctgcccagcaggctcagcaccagcaggctcagcaacagcagcaacagcagcaa
cagcaacagcagcagcaacaagctgctcaacaccaaaggcaagcgagcggtagtgccacg
cctgcgcctggtaaataa
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integrated database retrieval system
