Podospora pseudocomata: QC762_711360
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Entry
QC762_711360 CDS
T09797
Symbol
DBP2
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC762_711360 (DBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_711360 (DBP2)
03009 Ribosome biogenesis [BR:
ppsd03009
]
QC762_711360 (DBP2)
Enzymes [BR:
ppsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QC762_711360 (DBP2)
Spliceosome [BR:
ppsd03041
]
Complex A
U1 snRNP components
U1 related factors
QC762_711360 (DBP2)
Complex B
QC762_711360 (DBP2)
Ribosome biogenesis [BR:
ppsd03009
]
Eukaryotic type
Pre-60S particles
Helicases
QC762_711360 (DBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Glyoxalase_3
P-loop_SecA
DUF2443
Motif
Other DBs
NCBI-GeneID:
87913894
NCBI-ProteinID:
XP_062739843
LinkDB
All DBs
Position
7:3426759..3429297
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AA seq
556 aa
AA seq
DB search
MSYGGGYGSRGGGGGGGYGGGGYDRNGGSNGYSNGGSNGYGGGGGGGYGGGYGGGGGGYG
GGGGGDRMAALGSGLQKQEWDMSALPKFEKSFYKEHPDVTNRSPAEVEAFRREHSMAITG
KDVPRPVQNFDEAGFPRYVMDEVKAQGFPAPTAIQAQGWPMALSGRDVVGIAETGSGKTL
TYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVP
KGPQIRDLQRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKII
GQIRPDRQTLMWSATWPKDVRNLASDFLTDFIQVTIGSMDLSANHRITQIVEVVSESEKR
DKMIKELEKIMEDKTAENKCLIFTGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVL
DQFKTGKSPIMVATDVASRGIDVRNITHVINYDYPNNSEDYIHRIGRTGRAGAKGTAITY
FTTDNAKQARDLVGVLREAKQVIDPRLEEMARYSGGGGGGRYGGYRGRGGGGGWRGGRSH
GANGSNAMPLGGKGRW
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggtggtggttacggctcccgcggcggtggtggtggtggtggttacggaggc
ggcggttacgatcgcaatggtggctccaacggctactccaacggtggctccaacggttac
ggtggcggcggcggcggcggttatggcggcggctacggcggcggcggtggtggttatggt
ggcggtggtggtggtgaccgtatggctgccctcggctccggtcttcagaagcaggagtgg
gacatgtccgcgcttcccaagttcgaaaagtccttctacaaggagcaccccgatgtcacc
aaccggtcgccagctgaggttgaggcgttcagacgtgagcacagcatggccatcactggc
aaggacgtgccccgtcccgtgcagaacttcgatgaggccggtttcccccgctatgttatg
gacgaggtgaaggcccaaggcttccctgctcccactgccattcaggctcagggttggccc
atggctctctccggtcgcgatgtcgtcggtattgccgagactggttccggaaagacactt
acttactgtcttcccgccatcgttcacatcaacgcccagcctctcctggctcctggcgat
ggtcccatcgtcttgatcttggctcccactcgtgagcttgctgttcagatccagcaggag
attagcaagtttggcaagtcgtctcgcattagaaacacgtgcgtctacggtggcgtgccc
aagggtccccagatccgcgatcttcagcgcggtgtcgaggtctgcattgccactcctggt
cgtctcattgacatgttggagtctggcaagaccaaccttcgtcgcgtcacctacctcgtc
cttgatgaggctgatcgcatgcttgacatgggtttcgagccccaaattcgcaagatcatc
ggccagattcgccccgatcgtcaaaccctcatgtggtccgctacctggcccaaggatgtc
cgcaaccttgcgtctgactttttgaccgacttcatccaggtcaccattggctccatggat
ctgtctgccaaccaccgcatcacccagattgtcgaggtcgtttccgagagcgagaagcgc
gacaagatgatcaaggagctcgaaaagatcatggaagacaagaccgctgagaacaagtgt
ctcatcttcaccggcaccaagcgcgttgccgacgagatcacccgtttccttcgccaggat
ggctggcccgccctctctatccacggtgacaagcagcagaacgagcgtgactgggtcttg
gaccagttcaagacgggcaaaagtcccatcatggttgccacagacgttgcctctcgtggt
atcgatgtgcgcaacattactcacgtgatcaactatgattatcccaataactcggaggat
tacatccatcgtattggtagaactggccgtgccggcgcgaagggcacagccatcacttac
ttcaccactgacaatgctaagcaggcgcgtgaccttgttggtgtcctcagggaggcgaag
caggttattgatcctcgtctcgaggagatggcgcgctacagcggtggtggtggtggtggc
cgttatggtggttaccgtggccgtggaggcggtggcggctggcgcggaggtcgttcgcac
ggcgctaatggctccaatgctatgcctctcggtggcaagggccgctggtaa
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