Podospora pseudocomata: QC762_711510
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Entry
QC762_711510 CDS
T09797
Symbol
PRP8
Name
(RefSeq) pre-mRNA-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
QC762_711510 (PRP8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsd03041
]
QC762_711510 (PRP8)
Spliceosome [BR:
ppsd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
QC762_711510 (PRP8)
Complex C
U5 SnRNP specific factors
QC762_711510 (PRP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
RRM_4
PROCT
Motif
Other DBs
NCBI-GeneID:
87913909
NCBI-ProteinID:
XP_062739859
LinkDB
All DBs
Position
7:complement(3489624..3497463)
Genome browser
AA seq
2371 aa
AA seq
DB search
MSFPPPPPGWGPPPPPPPPPPPGPPSSLPPPPAIPAPPPPGYQPPTNPQIAKFAQKKKEW
LRDQRNRFGEKRKGGFVETQKADMPPEHLRKIVKDIGDVSQKKYTNDKRSYLGALKFMPH
AVLKLLENMPMPWESAREVKVLYHVNGCLTLVNEIPRVIEPVFFAQWATMWTTMRKEKSD
RRLFKRMRFPPFDDEEPPLSWSENIEDVEPLEPIQMELDEDEEAAVYEWFYDHQPLLDTT
HVNGPSYKTWNLTLPQMASLYRLSRPLVSEVVDQNYFYLFELKSFLTAKALNVALPGGPR
FEPLYKDIDPNDEDFGEFNAMDRIIFRNPIRTECRVSYPYLYNALPRSVHLSWHSHPQVV
YTRTEDHNLPAFYFDTSINPISSRAVAPKNLTISHEDELFGQGSNEEPEEEEFELPVGVE
PFMADEELYTDDTASAIELWWAPFPFDRRSGRMVRAQDVPLIKHWYLEHCPPKQPVKVRV
SYQKLLKTYVLNELHKKKPKSLQKQSLLRSLKQTKFFQQTTIDWVEAGLQVCRQGFNMLN
LLIHRKNLTYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYR
LGNIDAFQLADGILYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNAGPVGKGP
GCGFWAPAWRVWLFFMRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLEL
RASVMADLMDMMPEGIKQNKVNTVLQHLSEAWRCWKSNIPWKVPGLPAAIENIILRYVKS
KADWWVSVAHYNRERIRRGATVDKTVAKKNVGRLTRLWLKAEQERQHNHMKDGPYVSSEE
AVAIYTTTVHWLESRKFSPIPFPSVSYKHDTKILILALERLREAYSTKGRLNQSQREELA
LIEQAYDSPGTTLERIKRFLLTQRAFKEVGIDMNDNYSTINPVYDIEPIEKISDAYLDQY
LWYQADQRHLFPAWIKPSDSEVPPLLVYKWAQGINNLDQVWETANGECNVMIETSLSKVY
EKIELTLLNSLLRLIMDHNLADYITAKNNVTLTYKDMSHVNSYGMIRGLQFSAFVFQYYG
LILDLLLLGPQRASEIAGPPQSPNDFLQFQDRDTETRHPIRLYTRYIDKIWVFLRFTADE
SRDLIQRFLTEQPDPNFENVIGYKSKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLPRSV
TTIEWEDTFASVYSKDNPNLLFSMCGFEVRILPKIRNQNDEFPVKDSVWSLVNNATKERT
AHAFLQVTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVNLL
DTIVKCETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPTSDKRWSKQ
TDVGVTHYRAGMSHDEETLIPNIFRYIIPWEAEFIDSQRVWTEYSQKRLEANQQNRRLTL
EDLEDSWDRGLPRINTLFQKDRSTLSFDKGFRTRAEFKIYQLMKSNPFWWTSQRHDGKLW
NLNAYRTDVIQALGGVETILEHTLFKATGFPSWEGLFWERASGFEESMKFKKLTNAQRSG
LNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKI
HESVVMDLCQVFDQELEALSIESVQKETIHPRKSYKMNSSCADIQLFASHKWNVTRPSLL
FDNKDVIEATTTNKFWIDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSLYPSPTGLMIGI
DLAYNLYSAYGQYFPGLKTLVQQAMSKIMKANPALYVLRERIRKGLQLYASESNQEFLNS
QNYSELFSNQTQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTS
VWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVNLLDFPNISIR
ASELQLPFQAAMKVEKLGDMILRATEPQMVLFNLYDEWLKSISSYTAFSRLILILRALHV
NQDKTKLILRPDKTVITQDHHIWPSLSDEDWIKVETQLRDLILNDYGKKNNVNVSSLTSS
EVRDIILGMEISAPSLQRQQAAEIEKQQQEQQQLTAVTTKTQNVHGEEIIVTTTSQFEQQ
TFASKTEWRTRAIATSNLRTRANNMYVSPLDNDVDDITYVMPKNILKKFIQIADLRVQVA
GYLYGASPADNDQVKEVRCIVMVPQIGGLRNVQLPQHLPQHDMLKGMEPLGIIHTTSGNE
LPYMSAMDVTDHARLLDAHPSWSKESTLTVAVSFTPGSVSLSAWALTPQGYKWGAENKDV
GSDQPQGFTTTMGEKRQLLLSEKFRGFFLVPESGKWNYSFMGSAFGSLEKKPVHVKLDTP
APFYSDQHRPIHFSSFNELEDIWVDRQDNFA
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcctcctccccccggatggggtcctccgcctccaccccctccgccgccg
ccgcccggaccgccgtcctcacttcctccgccgcctgctattccggcaccacctccccct
ggataccagcctcccacgaaccctcagattgccaagtttgcccaaaagaagaaggaatgg
cttcgggaccagcgcaatcggtttggcgagaagcggaagggtggcttcgtggaaacgcaa
aaggccgatatgccgccggaacacctgcgtaagattgtgaaggatatcggcgacgtctcg
cagaagaagtacaccaatgacaagcgaagctatcttggtgcgctgaaattcatgcctcat
gcagttttgaagctgctcgagaacatgccgatgccttgggaatcagcgagggaggtcaag
gtgctctaccatgtcaatggttgcctgacgctcgtcaatgagattccacgcgtcatcgaa
cccgtattttttgcacagtgggctactatgtggacgaccatgcgcaaggagaagagcgat
cgaagactgttcaaacggatgcggttccctccgtttgacgatgaagagccacccctttct
tggtccgagaacatcgaggatgtcgaaccgctggagccgatccagatggagctcgacgaa
gacgaagaggctgctgtgtacgaatggttttatgaccatcaacctctcctggacacgaca
catgtcaatggcccaagctacaagacatggaacctcacactgccacaaatggcgagctta
tatcggctcagtcgtcctttggtatctgaggttgttgatcagaattacttttatctcttc
gagctcaagagctttctcacggccaaagccttgaatgttgcgctgcctggcggtcctcgc
tttgagccactttacaaagatatcgaccccaatgacgaggatttcggcgagttcaacgcc
atggaccgcatcattttcagaaaccccatccgaactgaatgtcgagtgtcctatccctat
ctttacaatgctctcccgcgcagcgtccacctttcctggcattcgcatcctcaggtagtg
tacacccgaacagaggaccacaatctccctgcattctacttcgacaccagcatcaacccc
atctcatctcgggccgtggcgccgaagaacctcaccatcagtcatgaagacgaacttttt
ggccagggcagcaacgaggagccagaagaggaggagttcgagcttcccgtgggtgttgag
ccgttcatggccgacgaggagctttatacagacgacacggcatctgcgatagaactgtgg
tgggcaccgtttccatttgaccgtcgctctgggcgtatggttcgggctcaagatgttcct
ctaatcaagcactggtacctcgaacactgtccaccaaagcagcctgtgaaggttcgcgtc
tcataccagaagcttttgaagacgtacgtcctcaacgagcttcacaagaagaagcccaag
tcgttgcaaaagcaaagcttgctcaggtccctgaagcagaccaagttcttccagcagaca
accatcgactgggtagaggcaggtcttcaagtctgtcgccaaggtttcaacatgcttaac
ttgttgattcatcgcaagaaccttacctatctccatcttgattacaatttcaacctgaag
cccgtcaagactctcaccaccaaggaacgcaaaaagtcgagatttggaaacgcctttcat
ctaatgcgagagatcttgcggctcaccaagctcattgtcgatgcccaagtgcaatatcgg
ctgggtaacattgacgcatttcagctcgccgatggtatcctctatgcgttcaaccatgtg
ggacagctgacgggaatgtatcgatacaagtacaagctcatgcaccagattcgctcttgc
aaggatttgaagcacttgatttactaccggtttaacgcgggccctgttggcaaaggccct
ggctgcggtttctgggctcctgcctggagagtctggctgtttttcatgcgcggtattatc
cccttgctggagcgctggcttggaaatttgctgtctcgtcagtttgaaggccgccacagc
aaaggcgttgccaagaccgtcacgaagcagcgtgtcgagtcacatttcgatctcgagctt
cgggcttcggtcatggcggacctgatggatatgatgcccgagggtatcaaacaaaacaag
gtcaacaccgtgttgcagcatctctctgaggcctggaggtgctggaagagcaatattccg
tggaaggtcccaggattgcctgctgctattgagaacatcatcctcagatatgtcaagtcc
aaggctgattggtgggtctcggttgctcactacaacagagagcgcatcagaaggggtgcc
accgtggacaagaccgtcgccaagaagaacgtcggccgccttacccgtctctggctcaag
gctgagcaggaaaggcaacacaaccatatgaaagatggaccatatgtatcctccgaggag
gccgtggccatctatacgaccactgtgcattggctcgagtcccgcaagttctcccctatt
cctttcccgagtgtttcctacaagcatgataccaagatcctcatcttggccctcgagcgt
ctccgcgaagcctactccaccaaggggagacttaaccagagccaaagagaagagctggcc
cttattgaacaggcatacgacagcccgggaactactctcgagcggatcaagcgcttcctc
ttgacgcagcgggccttcaaggaggtgggcattgatatgaacgacaattatagcaccatc
aaccctgtgtacgacattgagcccattgagaagatcagcgatgcctacctggatcagtat
ctctggtatcaagccgaccagcgtcacctctttcctgcttggatcaagccgtcggactct
gaggtccctcctctcctcgtgtacaagtgggctcaaggtatcaacaatctcgaccaagtc
tgggaaaccgcaaatggggagtgcaacgtcatgatcgagacctccttgtccaaggtgtac
gagaagatcgagctcacgttgctcaattcgctacttcgcctcatcatggaccacaatttg
gccgactacattacagccaagaacaacgtcacactgacctacaaagacatgagccatgtc
aatagttacggcatgattcgtggccttcagttttcggcgtttgttttccagtattatggg
ctgattctcgaccttctactcctggggcctcagcgcgccagcgagattgccggcccgcct
caaagccccaacgatttcctccagttccaggatcgcgacacggagacgagacaccccatt
agactgtacaccagatacattgacaaaatttgggtctttctccgcttcacggctgacgaa
tcgcgcgacctcatccagcggtttcttaccgaacaaccggatccaaattttgagaatgtc
atcgggtacaagagcaagaaatgctggccgagagattctcgcatgcgcttgatgagacac
gatgtcaacctcggcagggctgtcttttgggatctgaagaatcgactaccaagatccgtc
acgaccatcgagtgggaagacacatttgcaagtgtctacagcaaggacaacccaaacctc
ctgttctcaatgtgcggcttcgaggtgcgcattttgcccaagattcgcaaccagaatgac
gagtttcccgtcaaggacagcgtttggtcactggtgaacaacgccaccaaggagcgcacc
gcccacgcctttttgcaggttaccgaggaggacattcagaagttcaacaaccgcattcgc
caaatcctcatgtcctcgggctcaaccacgttcaccaagattgccaacaagtggaacact
gccttgatcgctctcttcacgtactaccgcgaggctgctgtttcgactgtcaatctactt
gacacaattgtcaagtgtgagactaagatccaaacccgagtcaagattggcctcaactca
aagatgccgtcgcggttcccgcctgctgtattttataccccgaaagaacttggtggtctg
ggtatgatctctgggtctcacatcttgatcccaacgagcgataagcgatggtccaagcag
accgatgtcggggtcactcattaccgtgccggcatgtctcacgacgaggaaacccttatt
cccaacatcttccgctacatcattccctgggaggccgagttcatcgattcccaacgcgtc
tggacggaatattcgcagaagaggctcgaggccaaccagcaaaacaggaggctgaccttg
gaggatctagaagacagctgggatcggggtctgccgcgcatcaacacgctgttccaaaag
gaccgcagcacgctgagcttcgacaaggggttccgcacccgggcagagttcaagatttat
cagttgatgaagagcaatccgttctggtggaccagtcagcgacacgatggcaaactttgg
aacctcaatgcctatcgcaccgatgtcattcaggcactgggaggtgttgagacgattctc
gagcatactcttttcaaggcaacaggcttcccttcttgggagggtctattctgggagcgg
gcctccggtttcgaagaatcaatgaagttcaaaaagctcacaaacgcccagcggtccggt
ctcaatcaaatccccaaccgtcgattcactctttggtggagcccaaccatcaacagagca
aatgtttacgttggtttccaggtccaactggatttgactggtattttccttcacggcaag
atcccgaccctcaagatctctttgatccagatcttccgcgcccatctgtggcagaaaata
cacgagtcggttgtcatggatctctgccaggtctttgatcaggaactggaagctctgagc
attgaatctgttcagaaagagacgatccacccgcgtaaatcctacaagatgaacagttcc
tgcgcggacatccagctgtttgccagccacaagtggaatgttacgcgaccgtccctcctg
ttcgacaacaaagatgtcatcgaggcaaccacgacaaacaagttctggattgacgttcag
ctgcgctacggcgactacgactcccatgatattgaaagatatgtcagggccaagtatctg
gattacaccaccgatagcatgagcttgtacccatcgcctaccggcctcatgattggtatc
gaccttgcctacaacctctattctgcttacggccagtacttcccaggcctgaaaacgctg
gttcagcaagccatgtccaagatcatgaaggccaatcctgctctttatgtgttgcgtgag
cgtatccgcaaaggtcttcagctgtatgcctctgagagcaaccaagagttcctcaactcg
caaaattattccgagcttttcagcaatcagactcagctcttcattgacgacacaaatgtg
taccgtgtgacgatccacaagaccttcgagggtaacctgaccacgaagcccatcaacggt
gccatctttatcttcaaccctcggactgggcagctgttcctgaagattatccacaccagc
gtctgggcagggcagaagcgcttgggccagttggcgaaatggaaaacggctgaagaagtg
gcagcattgatcagatcccttccagtagaagagcagcccaagcagctcattgtcacgcgg
aagggtcttttggatcctctggaggtcaatctcctggacttccccaatatctcgattcgc
gcttctgagctccagcttcccttccaggctgccatgaaggtggagaagcttggcgacatg
attttgcgtgccaccgagcctcaaatggttcttttcaacctctacgatgagtggctcaag
agcatttcttcatacacagcattctctcgtcttattctcattctccgtgccctgcacgtc
aaccaggataagacgaaattgatattgcgtcccgacaagactgtcatcactcaggatcat
catatctggccctccctctcggatgaggattggatcaaggtcgaaacgcagcttcgtgat
ctgatcctgaatgactacgggaagaagaataatgtcaatgtctccagtttgacaagtagc
gaagtacgcgacatcatcttgggtatggaaatttcggccccctctctccagagacaacaa
gctgccgagattgaaaagcagcaacaggagcagcagcagcttactgctgtcacaaccaag
actcaaaatgtgcatggagaggagattatcgtcacgacaacatcgcagtttgaacagcag
acatttgcgtccaagaccgagtggcgcacgagggctatcgccacgtcgaatttgcggaca
agggcgaacaatatgtacgtgtcaccactggacaatgatgtggatgacatcacatatgtg
atgcccaaaaatatcctcaagaagtttatccagattgccgatcttcgagtgcaggtcgcg
ggctatttgtatggagcttcgcctgccgacaatgatcaagtcaaggaggttcgctgtatc
gtcatggtgccccagattggtggtttgcgcaatgttcagctgcctcagcatctccctcaa
catgatatgctcaaaggaatggagcctctcggcattattcacacgacatctggtaatgag
cttccttatatgtcggccatggatgttaccgatcatgcccgattgcttgatgcccaccca
tcgtggagcaaggagagcaccctaactgtggcagtgtcctttacaccgggcagtgtctca
ctgtcagcctgggcgctcacgccgcagggctacaaatggggtgcagagaataaggatgtc
ggcagcgaccagccccaggggtttaccacaaccatgggcgagaagaggcagttactgttg
agtgaaaagttcaggggcttctttctagtgcctgaatcagggaagtggaattacagcttc
atgggtagtgcctttggcagcctggagaagaaaccggtccatgttaagctggatacacct
gcgccgttttacagcgatcaacaccgtccgatccacttctccagtttcaacgagttggaa
gatatctgggtggacagacaggataactttgcatag
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integrated database retrieval system
