Ectopseudomonas oleovorans: BN5_0187
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Entry
BN5_0187 CDS
T03772
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ppse
Ectopseudomonas oleovorans
Pathway
ppse00300
Lysine biosynthesis
ppse00470
D-Amino acid metabolism
ppse01100
Metabolic pathways
ppse01110
Biosynthesis of secondary metabolites
ppse01120
Microbial metabolism in diverse environments
ppse01230
Biosynthesis of amino acids
Module
ppse_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN5_0187 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN5_0187 (dapF)
Enzymes [BR:
ppse01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BN5_0187 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CDM38801
UniProt:
W6QXF0
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All DBs
Position
complement(193489..194319)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLISQHAHVQPKHAKQWGDRHVGVGFDQLLIVEPPSHPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKKVIRVETKSGIIELRVQNDGQVCVNM
GAPRLQPEQVPFQADQAALTYRVDVEGQSVELAVLSMGNPHAVLRVDNVDDAPVHTLGPK
LEHHPRFPQRVNVGFLQVLDRKHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPV
QLELPGGKLSIEWAGEGQPVMMTGPAARVYEGQIRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctattgcgctttaccaagatgcacggcctgggtaatgacttcatggtcctcgacctg
atcagtcagcacgcccacgtgcaacccaagcatgccaaacaatggggcgaccgccacgtc
ggcgtcggtttcgaccaactgctgatcgtcgagccgccgagtcacccggatgtcgacttc
cgttaccgcatcttcaactccgacggctcggaagttgagcagtgcggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgaccaccaagaaggtcattcgcgtcgag
accaagagcggcatcatcgagctgcgcgtgcagaacgatggccaggtctgcgtcaacatg
ggcgcaccgcgcctgcagccggaacaggtgccgttccaggccgaccaggccgcgctgacc
tatcgcgtcgacgtcgagggccagagcgtcgagctggccgtgctgtcgatgggcaatccg
catgcggtgctgcgcgtcgacaacgttgatgacgcaccggtgcatacgctcgggccgaag
ctggaacaccacccgcgcttcccgcagcgggtcaatgtcggcttcctccaggtgcttgac
cgcaagcatgcgcgcctgcgtgtatgggagcgtggcgccggggaaacccaggcctgcggc
accggcgcctgcgcggcggccgttgcggctattcgccagggctggatggattcgcccgtg
caactggaactgccaggcggcaaactgtccatcgaatgggcaggcgagggtcagccggtt
atgatgaccgggcccgctgcccgcgtatacgaaggacagattcgcctatga
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