Ectopseudomonas oleovorans: BN5_0188
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Entry
BN5_0188 CDS
T03772
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppse
Ectopseudomonas oleovorans
Pathway
ppse00300
Lysine biosynthesis
ppse00470
D-Amino acid metabolism
ppse01100
Metabolic pathways
ppse01110
Biosynthesis of secondary metabolites
ppse01120
Microbial metabolism in diverse environments
ppse01230
Biosynthesis of amino acids
Module
ppse_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN5_0188 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN5_0188 (lysA)
Enzymes [BR:
ppse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BN5_0188 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CDM38802
UniProt:
W6QQM0
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All DBs
Position
complement(194330..195577)
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AA seq
415 aa
AA seq
DB search
MEAFNYRDGELFAEGVALSALAQRFGTPTYVYSRAHIEGQYRAYADALAGMPHLVCFAVK
ANSNIGVLNVLARLGAGFDIVSSGELERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVH
CFNVESSVELERLQKVAAELGVKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEA
VYARAAELPNLEVIGVDCHIGSQLTTLEPFLDALDRLLLLVDKLAARGITIKHLDLGGGL
GVQYRDEQPPLAGDYITAVRKRLQGRDLGLVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVSPVQPREGESRNYDLVGPICETGDFLAKDRQLVLAEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQAYEVRRRETVQELYAGESLLPA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttcaactaccgcgacggtgagctgttcgcggaaggcgttgccttgtccgcg
ctggcccagcgcttcggcacgcccacctacgtctattcccgcgcccatatcgaagggcag
taccgcgcctatgccgatgccctggccggcatgccgcacctggtctgcttcgcggtcaag
gccaactccaatatcggcgtgctgaacgtattggcgcgcctcggtgccggcttcgacatc
gtctccagcggtgagctggagcgcgtcctggccgccggtggcgagcctagccgcatcgtc
ttctccggcgttggcaagagccgcgacgacatgcgccgcgcgctggaagtcggcgtgcac
tgcttcaacgtcgagtccagcgtcgagctggagcgcctgcagaaggtcgctgccgaactg
ggcgtcaaggcgcccgtctcgctgcgggtcaatccggacgtggacgccggcacccacccg
tacatttccactggcctcaaggaaaacaagttcggcatcgacatcgagcaggccgaggcg
gtctacgcccgcgctgccgagctgccgaacctggaagtgatcggcgtcgactgccacatc
ggttcgcagttgaccaccctcgaacccttcctcgatgccctggatcgcctgttgctgctg
gtcgacaagctggccgcgcgcggtatcaccatcaagcatctggatctcggtggtggcctt
ggcgtgcagtaccgcgacgagcagccgccgctggccggcgactacatcaccgccgtgcgc
aaacgcctgcaaggtcgcgacctgggcctggtgttcgaaccgggccgcttcatcgtcgcc
aacgccggcgtgctgctgactcaggtggaatacctcaagcacaccgagcacaaggacttc
gccatcgtcgatgcggcgatgaacgatctgatccgccccgccctgtatcaggcgtggatg
gacgtgtcgccggtgcagccgcgtgaaggcgagtcgcgtaactacgacctggtcggaccg
atctgcgagaccggcgacttcctggccaaggatcgtcagttggtgctggccgagggtgac
ctgctggccgtgcgctcggcaggcgcctatggcttcgtcatgagctccaactacaacacc
cgcggccgcgccgccgaggtgctggtggatggcgaacaggcttatgaagtgcgtcgtcgc
gagacagtccaagagctctatgccggcgaaagcctgctgccggcctga
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