Pseudomonas pseudoalcaligenes: BN5_1025
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Entry
BN5_1025 CDS
T03772
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppse
Pseudomonas pseudoalcaligenes
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppse03400
]
BN5_1025 (sbcD)
DNA repair and recombination proteins [BR:
ppse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN5_1025 (sbcD)
Archaeal homologous recombinant proteins
BN5_1025 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
CDM39627
UniProt:
W6QT06
LinkDB
All DBs
Position
1104256..1105476
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AA seq
406 aa
AA seq
DB search
MSLRVLHTSDWHLGQHFMGKTRQAEHQAFCAWLLEQVHAHQVDVLLIAGDVFDTGAPPSY
AREQYYRLVVELRDVGCALVVLGGNHDSPAMLGESRSLLAQLGTQVVPSVGVDLAEQVLV
LNDRTGQPGAILCAIPFIRPRDVLASQAGQSAQDKQQSLQQAIAEHYRALYELAASKRNE
LGLTLPIIATGHLTTVGASASESVREIYVGSLEAFPTSAFPPADYIALGHIHRPQKVGGL
EHIRYSGSPIALSFDEARQQKEVLLLTFAGATLQSITPLPVPVFQSMASLRGSLKELAGS
ITEAAAPGTPERPVWLEVQVSTDDYLSDLQSRINALCEGHPVEVLRIRRERGNAAASLAC
EARETLDELSVEDVFARRLQQETLDEEDALRLQGLYRQVLEALPKA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcgttctgcatacatccgactggcaccttggccagcacttcatgggcaag
acccgccaggccgaacaccaggctttttgcgcctggctgctggagcaggtgcacgcgcat
caggtggacgtgctgctgatcgccggtgatgtgttcgacaccggcgcaccgcccagttat
gcccgcgagcagtactaccgactggtggttgagttgcgcgacgtcggctgcgccctggtg
gtactcggcggcaaccacgactcgccggccatgctcggtgaaagccgcagcctgctggcg
caactgggcacccaggtggtgccgagcgtgggcgtcgacctggccgaacaggtactggta
ctcaatgatcgtactggccagccgggcgccattctctgcgccattccctttatccgcccg
cgcgacgtgctggccagccaggcggggcagagcgcacaggacaaacaacagtcgctgcag
caagctatcgccgagcattaccgagcactgtacgagctggcggcgagcaagcgtaacgag
ctgggcctgacgctaccgatcatcgccaccggtcacctcaccacagttggcgccagcgcc
agcgaatcggtgcgcgagatctacgtcggcagcctggaagccttccccaccagcgccttc
ccgccggcggactacatcgcccttggccatatccaccgcccgcaaaaggtcggcggcctg
gagcacattcgctacagcggctcgccgattgccctgtccttcgacgaggcgcgccagcag
aaggaagttctgctgctgacgttcgccggcgccaccctgcagtcgatcacgccactgccc
gtgccggtgttccagtccatggccagcctgcgcggctcgctcaaggagttggcaggctcc
atcaccgaggcagctgcaccgggcacccccgagcggcctgtatggctggaagtgcaagtg
agcaccgacgactacctgagcgacctacaaagccgcatcaacgccctgtgcgaagggcat
cccgtggaggtgctgcgtatccgtcgtgaacggggcaatgcggcagccagcttggcctgt
gaagcgcgagagacgctggacgagttgagcgtggaagatgttttcgctcgccgccttcag
caagagacgctggacgaagaggatgccctgcgcctgcagggtttgtatcggcaggtgctg
gaggcgctgcccaaggcctag
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