Pseudomonas pseudoalcaligenes: BN5_1072
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Entry
BN5_1072 CDS
T03772
Symbol
ffh
Name
(GenBank) Signal recognition 54 kDa protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ppse
Pseudomonas pseudoalcaligenes
Pathway
ppse02024
Quorum sensing
ppse03060
Protein export
ppse03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BN5_1072 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BN5_1072 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN5_1072 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppse02044
]
BN5_1072 (ffh)
Enzymes [BR:
ppse01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
BN5_1072 (ffh)
Secretion system [BR:
ppse02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BN5_1072 (ffh)
Eukaryotic Sec-SRP protein
BN5_1072 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
APS_kinase
AAA_31
AAA_33
YqeC
Thymidylate_kin
cobW
AAA_24
AAA_14
KTI12
AAA_16
TsaE
HrpJ
nSTAND3
6PF2K
AAA_18
ResIII
ATP_bind_1
AAA_30
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
CDM39674
UniProt:
W6RCR0
LinkDB
All DBs
Position
1153680..1155059
Genome browser
AA seq
459 aa
AA seq
DB search
MFENLTDRLSQTLRNVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVGKVKDRAV
GTEVSKSLTPGQAFVKIVRAELEELMGAANEDLALNATPPAVVLMAGLQGAGKTTTAGKL
AKFLKERKKKSVLLVSVDVYRPAAIKQLETLAGDLGVTFFPSDASQKPVDIANAAIREAK
LKFIDVVILDTAGRLAIDAEMMAEIQALHAAVKPVETLFVVDAMTGQDAANTAKAFGEAL
PLTGVVLTKVDGDARGGAALSVRHITGKPIKFIGMGEKSDALEPFHPDRIASRILGMGDV
LSLIEQAEQTLDREKAEKLTKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV
NLSQMGNAQGAAEKQFKQMEAIINSMTPAERRDPDIISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFTAKGGMAKMMRGMGGMLPGGGGMPKF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaatcttaccgatcgcctgtcccagacgctgcgtaatgtcacgggcaaggcc
aagctgaccgaagacaacatcaaggatacgctgcgcgaagtgcgcatggccctgctcgag
gccgacgtggctctgccggtggtcaaggacttcgtcggcaaggtcaaggatcgcgccgtt
ggtaccgaagtctccaagagcctgacgccgggccaggccttcgtgaagatcgttcgcgcc
gagctggaagagctgatgggcgctgccaacgaagacttggcgctcaatgcaactccgcca
gccgtggtgctgatggccggcctgcagggcgcgggcaagaccaccaccgccggcaaactg
gccaagttcctcaaggagcgcaagaagaagtctgtgctgctggtgtcggtcgacgtctac
cgtccggcggcaatcaaacagttggaaaccctggcgggcgacctcggggtgactttcttc
ccctccgatgccagtcagaagccggtggatatcgccaacgcagcgatccgcgaagccaag
ctgaagttcatcgacgtggtcatcctcgataccgccggtcgcctggccattgatgccgag
atgatggccgagatccaggcgctgcacgcagccgtcaaaccggtcgaaacgctgttcgtg
gtcgacgccatgaccggccaggacgccgccaacaccgccaaggcgttcggcgaggcgttg
ccgctgactggtgtggtgctgaccaaggtcgacggtgacgcccgtggtggcgctgccttg
tccgtccgtcatatcaccggcaagccgatcaagttcatcggtatgggcgagaagagcgac
gcgctcgagcccttccatccggatcgtatcgcctcgcgcatcctcggcatgggtgatgtg
ctcagcctgatcgaacaggccgagcagacccttgatcgcgagaaggccgagaaactcacc
aagaagctgaagaagggcaagggcttcgatctcgaagacttccgtgatcagctgcagcag
atgaaaaacatgggcggcctcggcggtctgatggacaagctgccgtccatcggtggcgtt
aatctgtcgcagatgggcaatgctcaaggtgcggcggagaagcagttcaagcagatggag
gcgatcatcaactcgatgacgccggccgagcgccgcgatccggacatcatcagtggctcg
cgcaagcgccgcatcgctatgggttccggtacccaggtgcaggacatcggtcgcttgatc
aagcagcacaagcagatgcagaagatgatgaagaaattcaccgccaagggcggtatggcc
aagatgatgcgcggcatgggcggcatgcttccgggtggcggcggaatgccgaaattctga
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