Ectopseudomonas oleovorans: BN5_1147
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Entry
BN5_1147 CDS
T03772
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ppse
Ectopseudomonas oleovorans
Pathway
ppse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BN5_1147 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppse03400
]
BN5_1147 (sbcB)
Enzymes [BR:
ppse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BN5_1147 (sbcB)
DNA repair and recombination proteins [BR:
ppse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BN5_1147 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN5_1147 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BN5_1147 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CDM39749
UniProt:
W6RD32
LinkDB
All DBs
Position
1238528..1239976
Genome browser
AA seq
482 aa
AA seq
DB search
MTSSIFWYDYETTGINPRCDRPLQVAGIRTDEALNEIGEPLNIYCRPSDDILPHPAACLV
TGIDPQRLQQQGLDEGEFMTRVHAALSAPGTCGAGYNSLRFDDEVTRYSLYRNFFDPYAR
EWQGGNSRWDLIDLVRTAYALRPEGIEWPEEEGRVSLKLERLTQANGIDHGQAHDALSDV
RATIGLARLLRERQTKLYDFLYQLRSKQRVMDQVRLLQPVLHVSGRFSAARHYLAPVLPL
AWHPRNRNALIVCDLQADPSPLLNLDADTLRSRLYTRREALAEGELPVPLKLLHINRCPV
VAPLSVLREADRQRLQLDWSVCQRHIDVLKNEQPLWLGKLASVYREEAFAGSHDPEQQLY
DGFIGDRDRRLCEQVRAAQPDALANNKKWPFDDARLPELLFRYRARNFPASLSVAESQRW
EAFCRQRLSDPEFGAPNTLAQFYAAMESLRANCSPEQLQVLQQWQAHAQALQARLAISFV
GI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacttccagcattttctggtacgactacgagaccaccggtatcaatccgcgttgtgat
cgtccgctgcaggtggcgggcattcgtaccgacgaggcgctgaacgagatcggcgagccg
ctgaacatctattgccggcccagcgatgacatcctgccgcacccggccgcctgcctggtc
accggtatcgacccgcagcgtctgcaacaacaggggctggacgagggggagttcatgacc
cgtgtgcatgccgcgttatcggcgcccggcacctgtggtgcgggatacaacagcctgcgc
ttcgatgatgaggtgacgcgttacagcctgtatcgcaacttcttcgacccttacgcgcgc
gaatggcagggcggcaacagccgctgggatctgatcgatctggtacgcactgcttacgca
ctgcggcccgaaggcatcgaatggcctgaggaggaggggcgcgtatcgctcaagctggag
cggctgacccaggccaacggcatcgatcacggccaggcgcacgatgcgctgtccgacgta
cgcgccaccattggcctggcacggctgctgcgcgagcggcaaacaaaactgtacgacttc
ctctatcagctgcgcagcaagcagcgggtcatggatcaggttcgcctgctgcagccagtg
ctgcacgtttccgggcgtttctcggcggcacgtcattatctggcgccggtcctgccgctg
gcctggcatccgcgcaatcgcaacgcactgatcgtctgtgatctgcaggccgatccatcg
cctctgctgaatctggatgccgacacgctgcgcagtcgcctctacacgcggcgtgaggcg
cttgccgaaggcgagttgccggtaccgctgaaactgctgcatatcaaccgctgtccggtg
gtggcgccgctgtcggtgttgcgtgaggcggatcggcagcgtttgcagttggactggtcg
gtttgtcagcgccatattgacgtgttgaagaatgaacagccattgtggctgggcaagttg
gcgagtgtttaccgagaagaggcctttgcaggcagtcacgatcccgagcaacagctgtac
gatggttttatcggtgatcgtgatcgtcgtttgtgtgagcaggtacgtgccgcacaacct
gacgcattggccaacaataaaaaatggccgttcgatgatgcacgactgcccgagttgttg
tttcgttatcgggcgcgcaattttccggccagtctgtccgtcgctgagtctcagcgctgg
gaagcattctgtcggcagcgtttgagtgatccagagttcggtgcacccaataccctggcg
caattttatgcggcaatggagtcgctgcgggctaactgcagccccgagcaattgcaagtg
ttgcagcaatggcaggctcatgcgcaggcgttgcaggcgcgtttggctataagtttcgta
gggatttaa
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