Ectopseudomonas oleovorans: BN5_2215
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Entry
BN5_2215 CDS
T03772
Symbol
dnaQ1
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppse
Ectopseudomonas oleovorans
Pathway
ppse03030
DNA replication
ppse03430
Mismatch repair
ppse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN5_2215 (dnaQ1)
03430 Mismatch repair
BN5_2215 (dnaQ1)
03440 Homologous recombination
BN5_2215 (dnaQ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppse03032
]
BN5_2215 (dnaQ1)
03400 DNA repair and recombination proteins [BR:
ppse03400
]
BN5_2215 (dnaQ1)
Enzymes [BR:
ppse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN5_2215 (dnaQ1)
DNA replication proteins [BR:
ppse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN5_2215 (dnaQ1)
DNA repair and recombination proteins [BR:
ppse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN5_2215 (dnaQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CDM40786
UniProt:
W6R354
LinkDB
All DBs
Position
complement(2341935..2342729)
Genome browser
AA seq
264 aa
AA seq
DB search
MCDNPNRLEKQGVTTENTVKRYVVLDTETTGMPVTDGHRIIEIGCVELLGRRLTGRHFHV
YLNPDREIDEGAIAVHGITNEYVADKPRFKDVADEFYEFIKGAQLIIHNAAFDVGFINNE
FALLGQSERADVSDYCSVLDTLMMARERHPGQRNSLDALCKRYGVDNSNRELHGALLDSE
ILADVYLAMTGGQTNLSLAGEGSDGDGSGRQQPTPIRRLDASRPRTRVIRASEEELAAHL
ARLAVIEKSAGGPSLWAQLEKAPE
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgacaacccgaatagattggagaagcaaggcgtgacaaccgagaataccgtcaag
cgctatgtggtgctggataccgaaaccacgggtatgccggtcactgacgggcaccgcatc
atcgagatcggttgtgtcgagttgttggggcgtcgcctgaccgggcgtcatttccatgtc
tatctcaaccctgatcgcgagatcgacgaaggcgccatcgcggttcacggcatcaccaac
gagtacgtcgccgacaagccgcgcttcaaggacgtcgccgatgaattctacgagttcatc
aagggcgcccaactgatcattcacaacgcggcgttcgacgttggcttcatcaacaacgag
ttcgccctgttggggcagagcgaacgcgccgacgtcagtgattactgctcggtgctcgat
accctgatgatggcgcgcgagcgtcatccgggccagcgcaacagcctcgatgcgttgtgc
aaacgttacggcgtcgacaactccaaccgcgaactgcacggcgccttgctcgactcggag
atcctcgccgacgtctacctggcgatgactggcgggcagaccaatctgtccctggccggt
gaaggttccgacggcgacggcagcgggcgccagcagcccacaccgatccgccgtctggac
gcctcgcgtccgcgcacgcgcgtcatccgtgccagcgaagaggagctggcagcccatctc
gcgcgcctggccgtgatcgagaaatctgcgggtggcccgtcgctgtgggcgcagttggaa
aaagcgccggaataa
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