Ectopseudomonas oleovorans: BN5_2806
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Entry
BN5_2806 CDS
T03772
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppse
Ectopseudomonas oleovorans
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppse03016
]
BN5_2806 (truD)
Enzymes [BR:
ppse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BN5_2806 (truD)
Transfer RNA biogenesis [BR:
ppse03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BN5_2806 (truD)
Prokaryotic type
BN5_2806 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CDM41366
UniProt:
W6R4S0
LinkDB
All DBs
Position
complement(2930149..2931207)
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AA seq
352 aa
AA seq
DB search
MNELQLLGPRAHGEACGRAVFKATAEDFQVDEVLDIPLTGQGEHLWLWVEKRGLNTEEAA
RRIARAAGLPLKAVSYAGLKDRQALTRQWFSLHLPGKADPDLATAQGDDLVILRSQRHNR
KLQRGAHTANGFTLRLTALEADRDALEQRLQRIAEQGVPNYFGLQRFGFDGGNVLQACDF
AARLELPVQRNLRSRLLSSARSYLFNQVLAKRVAAGTWNQAQIGDLLAFTASRSFFMAGE
TECIDPRLAILDLHPTGPLWGDGPLPSAGVTRQLEQEVADEAAQLVQWLIKADMAHERRI
LRLPIGGLSWHYPEPDILQLAFVLPAGCFATVVVRELLDLVPAGQTDTPCEF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttgcaactgctcgggccgcgtgcccacggcgaggcctgtgggcgcgcggtg
ttcaaggccacggccgaggacttccaggtcgacgaggtgctcgacatcccgctcactggg
cagggtgagcacctctggctatgggttgaaaaacgcggcctgaataccgaggaggccgct
cggcgtatcgcccgcgctgccggcctgccgctcaaggcggtcagttacgctggactcaag
gatcgtcaggcgctgactcgccagtggttcagcctgcacctgccgggcaaggccgatccc
gatctggcgaccgcgcagggtgatgatctggtcatcctgcgcagtcagcggcataaccgc
aaattgcagcgtggcgcccataccgccaatggtttcaccttgcgcctgacagccctcgaa
gctgatcgcgatgcgctggagcagcgcctgcagcgtatcgccgagcaaggcgtgcccaat
tacttcggcttgcagcgtttcggcttcgatggcggtaacgtgctgcaggcgtgcgatttt
gccgcgcgcctggagttgccggtgcagcgcaacctgcgctcgcgcctgctctcttcggcg
cgcagctatttgttcaatcaggtgctggccaagcgcgtggcggcaggcacctggaaccag
gcacagatcggtgacttgctggccttcactgccagtcgcagtttcttcatggctggcgag
actgagtgcattgacccgcgcctggccattcttgacctgcatccgaccgggccgctgtgg
ggcgacgggcctttgccgagcgctggtgtgacccggcagctggagcaggaagtagccgat
gaggctgcgcaactggtgcaatggctgatcaaggcggacatggcgcacgaacggcgaatt
ctgcgcctccccatcggcggcctgtcatggcattatcccgaacccgatattctgcaactt
gcattcgtcctgccggccgggtgtttcgccaccgtggtggtgcgcgaattgctcgatctg
gtgccagcagggcagacggatactccatgcgaattctga
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