Pseudomonas pseudoalcaligenes: BN5_2820
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Entry
BN5_2820 CDS
T03772
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
ppse
Pseudomonas pseudoalcaligenes
Pathway
ppse03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN5_2820 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppse03032
]
BN5_2820 (rnhB)
Enzymes [BR:
ppse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
BN5_2820 (rnhB)
DNA replication proteins [BR:
ppse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
BN5_2820 (rnhB)
Elongation factors (archaeal)
BN5_2820 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
CDM41380
UniProt:
W6QWZ2
LinkDB
All DBs
Position
complement(2947009..2947605)
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AA seq
198 aa
AA seq
DB search
MQLGLDFTLVEELVAGVDEVGRGPLCGAVVTAAVILDPARPILGLNDSKKLSEARRAVLF
DEIREKALAWCIARAEVEEIDQLNILHATMLAMQRAVEGLSVTPKLALIDGNRCPKLAVP
SAPVVKGDSRVPAIAAASILAKVSRDREMVEMDRLYPGYGIAGHKGYPTPVHLEALKRLG
PTPIHRRSFGPVRALLEV
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggggctcgacttcacgctggttgaggaactggtcgcgggggttgacgaggtc
ggtcgtggcccgctctgcggtgcggtggtcacggcggcggtgatcctcgacccggcgcgg
ccgattcttggcctgaatgactcgaagaagctttccgaggcgcgtcgcgcggtgttgttc
gatgagattcgcgagaaggccctggcctggtgcatcgcccgcgccgaggtggaggagatc
gaccagctgaatatcctgcatgccaccatgctggcgatgcagcgtgccgtcgaaggcttg
agcgtgacgcccaagttggcgctgatcgacggcaaccgttgtccgaaactggcggtgccc
agcgccccggtggtcaagggcgacagtcgggtgccggccatcgctgcggcatctattctg
gccaaggtcagtcgcgaccgcgagatggtggagatggatcgcctctatcccggttacggc
atcgctggccacaagggctaccccacacctgttcatctcgaagcgctcaagcgcctgggg
ccgacgccgattcatcggcgttcgttcggcccggtgcgcgcactgctcgaagtctga
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