Ectopseudomonas oleovorans: BN5_3212
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Entry
BN5_3212 CDS
T03772
Symbol
recC3
Name
(GenBank) exodeoxyribonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ppse
Ectopseudomonas oleovorans
Pathway
ppse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BN5_3212 (recC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppse03400
]
BN5_3212 (recC3)
Enzymes [BR:
ppse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BN5_3212 (recC3)
DNA repair and recombination proteins [BR:
ppse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN5_3212 (recC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CDM41768
UniProt:
W6R0L6
LinkDB
All DBs
Position
complement(3343163..3346624)
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AA seq
1153 aa
AA seq
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MQELQPGLVVIHGNHLEELRALAVQWMRSHPLRPLENEVLLVQSNGIAQWLKLALAEDPH
NGGCGIAAALDVQLPARFLWQVYRSVLGVQTTPQSSPLDKAALSWRLMRLLPSLLEKPVF
ASLQRFLEQDDEQRKLHQLCERLADLFDQYQVYRADWLEDWAVGRDQLRHIKGTAQPLDA
PNLWQAQLWREVLADVGEGALEQSRAGVHKRFVAHLRSAAQAPKGLPRRVVVFGISSMPA
QVLEALKELSRYSQVLLCVHNPCRHHWGDIVADKDLLAHHYRRQPAREVGTVANEHGQAL
LAAWGKQGRDYINLLDQHDEPGSYRHLLDGLNGGRIDLFTEPDTTTLLGQLQSDILELRP
LAESRETWGPVEVSADRSLRFHVVHSMQREVEVLHDQLLARFSADPQLSPRDVIVMVPDI
NAYTPHIDAVFGQVPRHDPRYLPFTVSDQGQRGRQPLLIALEHLLKLPHSRFAASDILDL
LDVPALRARFAINEADVPTLQRWIDGAGVRWGLDAQQRESLGMPQGLEQNTWRFGMRRML
LGYAVGRGPELKGIEPYDEVSGLEAALAGPLLTLLDHLEVALQELQQPATPVQWAERLQA
LLKVFFRSASDAEELLLNQLLKLLEGWLRTCELAQFAQPLPLSVVHEAWLSGIEDGGLSQ
RFLAGAVNFCTLMPMRAIPFKVVCLLGMNDGDYPRQQSPVDFDLMRNDYRPGDRSRREDD
RYLLLEALLSARKQLYVSWVGRNIRDNSERVPSVLIGQLRDHLASGWRSASGQPLLPALT
QEHPLQPFSAAYFANQPGPDGLFTYSIEWREVHDEHALQPEGERLPAPVQDTPLNLRQLS
EFVRDPVGAFFTQRLKVNFDDDELVNRDDEAFQLDGLENWQHQDRLTQALKRWVEEAYDP
EQAATELGLQVQRLQREGALPLGGFGTLSASALVGPMPGLLARYHAQLQAWPELEEGQSA
AVIDATDELPGLKDWLGGIRRNALDERAYLQLDSKKLCTDDSYCWHHLVRPWLRHLALQL
NGPACTTILVGLNGDVVFQPVPAQQAQQQLQALLEAWVAGMKEPLPVACKSAFVWLAAGG
ENSDNGEAAYAKARETYEGSYTVEGEVQRSFAQRRAYPDFDQLCASGQFPAWAKRLYGGL
FGHFTPTDAGSDQ
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagcttcagcctggtcttgttgtcatccatggcaatcatctagaagaactgcga
gccctcgcggtgcagtggatgcgcagtcacccgctgcgaccattggagaacgaagtgctg
ctggtgcagagcaatggcatcgcccagtggctgaagctggcgctggccgaagacccgcac
aacggcggctgcggtattgccgcggcgctggatgtgcaactgcccgcgcgctttctgtgg
caggtgtatcgctcggtgctgggggtgcaaaccaccccgcagtcttcgccgctggacaag
gccgccctgagctggcggctgatgcgtctgctgccgagcttgctggaaaagccggtgttc
gcaagcctgcagcgctttctggaacaggacgacgaacagcgcaagctgcaccaactgtgc
gagcggctggcggacttgttcgaccaataccaggtgtaccgcgccgattggctggaagac
tgggctgtcgggcgcgatcaactgcggcatatcaagggcactgcgcagccgctggatgcg
ccgaacctgtggcaggcgcagctatggcgcgaggtactggcagacgtaggcgaaggcgcg
cttgagcaaagccgcgcaggggtgcacaaacgcttcgtcgcccacctgcgcagcgccgcc
caggcgccgaaggggctgccacgccgggttgtggtgttcggtatttcctcgatgcccgca
caagtgcttgaagcgctgaaggagctttcccgctacagccaagtgctgttgtgcgtgcac
aacccttgccgccaccactggggcgacatcgttgccgataaagacctgctggcgcaccac
taccgtcgccagcctgcccgagaggttggcaccgtagcgaacgagcatggccaagccttg
ctcgctgcctggggcaagcaggggcgcgactatatcaacctgctcgaccagcacgacgaa
cccggcagctatcgccacctgctcgacggcctcaatggcgggcgtatcgacctgtttacc
gagccggataccacaaccctgctaggccagttgcaaagcgacattctcgaactgcgccct
ttggcggaaagccgcgaaacctggggcccggtagaggttagtgccgaccgctcgctgcgt
tttcacgtggtgcacagcatgcagcgcgaagtggaagtgctgcacgaccaactgcttgcc
cgcttcagcgccgacccacaattgagcccgcgcgatgtgatcgtgatggtgccggacatc
aacgcctacaccccgcatatagacgcggtgttcggccaggtgccgcgtcacgacccgcgc
tacttgcccttcaccgtgtccgaccaaggccaacgcggtcgccagccgctgctgatcgcg
ctggagcacctgctcaagctgccccacagccgcttcgctgccagcgacattctcgacctg
ctggacgtgccggccctgcgcgcacgtttcgcgatcaacgaagcggacgtgccgaccctg
caacgctggatcgacggcgccggggtgcgctgggggctggatgcccaacagcgcgaaagc
ctgggtatgccgcagggcctggagcagaacacctggcgcttcggcatgcgccgcatgctg
ctgggctacgccgttgggcgtgggcctgagctcaagggcatcgagccctacgatgaagtg
tcggggctggaagcggccctggccggcccgctgctgaccttgctcgaccacttggaagtc
gctcttcaggagcttcagcaaccggccacacccgtgcagtgggccgagcgcctgcaagcc
ttgttgaaggtgttcttccgctcggcgagcgatgccgaagagttgctgctcaaccagttg
ctcaagctgcttgaaggttggctgcgcacctgcgagctggcgcagttcgcgcagccactg
ccgctgagcgtggttcacgaagcctggctcagcggcatcgaggacggtggcttgtcgcag
cgttttctggccggtgcggtgaacttctgcaccctgatgccgatgcgggcgattccgttc
aaagtggtttgcctgctgggcatgaacgatggcgattatccgcgccagcaatcgccggtc
gatttcgacctgatgcgcaacgactatcgcccaggtgaccggtcgcgacgtgaagatgac
cgctacctgctgctcgaagccctgctctcggctcgcaagcaactgtatgtgagctgggtg
ggccgtaatattcgcgacaacagcgagcgcgtgccctcggtgctgatcggccagctacgc
gaccacctggccagcggctggcgctcggccagcggccaaccgttgctgcccgcactgacc
caggagcacccgctacaacccttcagcgccgcgtacttcgccaaccagccggggcctgat
ggcttgttcacctattccatcgagtggcgcgaggtgcacgacgaacatgccttgcagcca
gaaggcgagcgcttgcccgcgccggttcaggacacaccgttgaacctgcgccaactttcc
gagttcgtacgcgacccggtgggcgccttcttcacccagcgcttgaaggtcaacttcgat
gacgacgagttggtaaaccgcgatgacgaagccttccagctcgatggcctggaaaactgg
cagcaccaggataggctcacccaggcgctaaagcgctgggtagaggaggcgtacgacccc
gaacaggccgcgaccgaactgggcctgcaagtgcagcgcctgcaacgcgagggcgccttg
ccgctgggcggcttcggcaccttgagtgcctcggcgctggtggggccgatgccgggcctg
ctggcgcgctaccacgcgcaactgcaagcctggcctgagctggaagagggtcagagcgct
gccgttatcgacgccaccgacgagcttcccggcctcaaggactggctgggtggcattcgc
cgcaatgcgttggatgagcgagcttacctgcaactggacagcaaaaagctgtgcaccgac
gacagctattgctggcaccacttggtgcggccttggttgcggcacctggcgttgcagttg
aacgggcctgcctgcacgacgattctggtgggcttgaatggggacgtggtgttccagcca
gtgcccgcgcaacaggcgcagcaacagttgcaagcgctgctcgaagcctgggtggcgggc
atgaaggagccgctgccggtggcctgcaaaagtgctttcgtctggttggctgcgggcggg
gagaacagtgacaacggcgaggcggcctacgccaaggcgcgtgaaacctacgaaggtagc
tacacggtcgagggcgaggtgcagcgctcgttcgcccagcggcgggcttaccccgacttc
gaccaactgtgcgcaagcggccagttcccagcctgggccaagcgcttgtatggcggcttg
ttcggccacttcaccccgaccgacgcagggagcgaccaatga
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