Pseudomonas pseudoalcaligenes: BN5_3295
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Entry
BN5_3295 CDS
T03772
Symbol
sbcC
Name
(GenBank) SMC domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppse
Pseudomonas pseudoalcaligenes
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppse03400
]
BN5_3295 (sbcC)
DNA repair and recombination proteins [BR:
ppse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN5_3295 (sbcC)
Archaeal homologous recombinant proteins
BN5_3295 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_29
AAA_15
ABC_tran
AAA_21
cobW
nSTAND3
AAA
RsgA_GTPase
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CDM41850
UniProt:
W6QYF0
LinkDB
All DBs
Position
complement(3428303..3431737)
Genome browser
AA seq
1144 aa
AA seq
DB search
MKIISLRLKNLNSLKGEWKIDFAAEPFAGSGLFAITGPTGAGKTTLLDAICLALYHRTPR
MSTLSASGNELMTRHTADCLAEVEFEVKGQGYRAFWSQRRARDKVDGALQAPKVELARIA
DGEILTDKIREKESLTAELSGLDFERFTKSMLLAQGGFAAFLEANANQRAELLEELTGTE
IYGQISQQVYERTKAAEQALNLLKSRAQGMELLDEAQRAELQAEQQRLSLEESPLLARQQ
ALQAQRRWREALQQAEQQREQARLGLQQAQQARNEAAGELQRLAASEPAARLQPLYLAWQ
QAQQDRQQAQQVLDDLHQQQRHSAEREHQQLWLASRYAQQSVSLRHEELQRLAGQRETLH
ARMSTAPQRERLGELLGSWRVQFDQRGQLLKEQQALHARMAQEGEQLAALQQQRDQLGVQ
QADALKRLEDARASEARQQSELQVLLGEGDEAGLRQRWQQLQVQGRVLDRLEQLAQSREQ
TAAQVAELTPRLAQLQQQHTRKNDEITGLRERYKALKQQQADKEKLLEQEQRIQDLEAYR
AQLQPGEACPLCGSHEHPAVSQYQALNVSATRQALEQCRNELAQLESQGGTLRDELTRLV
TQIAQVQQQLEQASQQAAQQDAQWQQQLIEQALQISDGAALRELQRQHEQSLTHLQTRLA
LVETGQAQLAQARGAREVAERALADAQQRLALLARDEENLQARQAEQGQGLQRLQQALRH
HEQVLLSSLEGFAVELPSDAGLWLDEQEQAWRDWQQAQAQDQQLQEQQREAQRLLADAET
QAGHWQQRWQDEGALTLAEPEPSAQPQLALNEAANSLASAQRESDALRGREQSQQTLLLQ
LQQRSSEAEQHWLTALTTSPFSDLAAFLAALLDEGERERLAALQARVERALTEASTLLAA
ADAQLLKLSATPQTELALGELDEQLQVLQSELRALSQRQGELRAQLQADETRRSSQQSLF
AEISAQESEQRLWQQLNGLIGSADGAKFRKFAQGLTLDHLIHLANRQLTRLHGRYQLARK
SSGELELEVRDTWQADVARDCRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFG
TLDGETLEVALDALDNLNASGKTIGVISHVEAMKERIPVQLRVHKGVGLGYSRLDARFAV
KEGA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcatcagcctgcgcctcaagaacctcaattccctcaagggcgagtggaagatc
gacttcgctgccgagcctttcgccggtagcggcctgttcgccattaccgggccgaccggt
gcgggcaagaccaccttgctcgacgccatttgcctagccctgtatcaccgcacgccgcgc
atgagcacgctgtcggccagtggcaacgagctgatgacgcggcataccgccgactgccta
gccgaggtcgagttcgaggtcaaggggcagggctaccgcgccttctggagccagcgccgc
gcgcgcgacaaggtcgacggtgcgttgcaggcgcccaaggtcgagctggcacgtatcgcc
gatggtgaaatcctcaccgacaagattcgcgagaaggaaagtctcaccgccgagctgtcc
ggcctcgatttcgagcgcttcaccaagtccatgctgctggcccagggcggctttgcggcg
tttctcgaagccaatgccaatcagcgcgccgagctgctggaggaactgaccggcaccgag
atttacgggcagatctcgcagcaggtctacgagcgcaccaaggctgccgaacaggcactc
aatctgctgaaaagccgcgctcagggcatggagttgctcgacgaagcgcagcgcgccgag
ctgcaggccgagcagcagcgtctaagcttggaggagtcgccgctgctggcccggcagcag
gctctgcaggcccagcgccgttggcgtgaggcactgcagcaggccgagcagcaacgggag
caggcgcgactcggactgcagcaggcccagcaggctcgtaacgaggcagccggtgaactg
cagcgcctggccgccagtgagccggcagctcgattgcagccgctgtatctggcctggcag
caggcgcagcaggacaggcagcaggcacagcaggtgctggatgacctgcatcagcagcaa
cgccacagcgctgagcgcgagcaccagcaactctggctggccagccgctatgcccagcaa
agcgtgagtctgcgtcacgaggagctgcagcgtctggccgggcagcgtgaaacgctgcac
gcacgcatgagtactgcgccgcaacgggaacgcctgggcgagcttctgggtagttggcgt
gtgcagttcgatcagcgcgggcaactgctcaaggagcaacaggcactgcacgcacgcatg
gcgcaggagggtgaacagctcgccgccttgcagcagcagcgtgatcagctcggtgtgcag
caggccgacgcgctgaagcggctggaggatgcgcgcgccagcgaggccaggcagcagagc
gagctgcaggtcctgctgggcgagggcgacgaggccggactgcgccagcgttggcagcaa
ctgcaagtgcaagggcgcgtattggatcgtctggaacagttggcgcagagccgtgagcaa
acggctgcacaggtcgccgagttgaccccgcgtctggctcagttgcagcaacagcacacc
cgcaagaacgatgaaatcaccggcctgcgcgagcgttacaaggcgctcaagcaacagcag
gccgacaaggaaaagctgcttgaacaggagcagcgcattcaggatctggaagcctaccgc
gcccagctgcagcccggcgaagcctgcccgttgtgtggttcgcacgagcatccggcggtc
agtcagtaccaggcgctcaacgtctccgccacgcgccaggcgctggaacagtgccgcaac
gaactggcgcagctggaaagccaaggcggcaccctgcgtgacgagctgactcggctggtc
acgcagatcgctcaggttcagcagcaactggagcaggcgagccagcaggccgctcagcag
gatgcgcagtggcagcagcaactgatcgagcaggccttgcagatatctgacggcgccgct
ttgcgcgaactgcagcgccagcacgagcagagcctgacgcatctgcagacgcgactcgcc
ttggtcgagaccgggcaggcgcaactggcacaggcgcgtggtgcacgtgaagtggccgag
cgggcgttggctgatgcgcagcagcgcctggcgctactggcgcgtgatgaggagaacctg
caggcgcgacaagccgaacagggccagggcctgcagcgtttgcagcaggcgcttcggcac
cacgagcaagtgctactgagcagtctggagggctttgctgttgagttgccgtcggacgct
ggcctctggctggacgagcaggagcaggcctggcgcgactggcagcaggcccaggcgcag
gatcagcaactgcaggagcagcagcgcgaggcgcagcgcctgctcgccgacgccgagaca
caggccgggcactggcaacagcgctggcaggacgaaggtgcgctgacgctggctgaaccc
gagccatcggcacagccgcaactggcgttgaatgaggccgccaacagcctggccagtgcc
cagcgcgaaagcgatgcgttgcgcggccgcgagcagagtcagcagaccttgttgctgcag
ctgcagcaacgctcgagcgaggccgagcagcactggctgacggctctgacgaccagtcct
ttcagcgatcttgcggcgtttctcgctgcgctgctggacgagggcgagcgagagcgtctg
gcggctttgcaggcacgtgtggagcgcgctcttaccgaggcttcgacgctgttggctgcc
gccgacgcgcagttgctgaagctcagcgctacaccgcagacagagctggcgcttggtgaa
ctggatgagcagttgcaggtactgcagagcgaattgcgtgccctgagccagcgccagggc
gagctgcgtgcgcagttgcaggccgacgagacgcggcgcagcagccagcagtcgctgttc
gccgaaattagtgcacaggagagtgagcagcgcctgtggcaacagctcaacggcctgatc
ggctcggccgacggcgccaagttccgcaagttcgcccagggcctgaccctcgatcacctg
atccacctggccaaccgtcaactgacgcgcctgcatgggcgttatcaactggcgcgcaag
agcagtggtgagctggagctggaggtgcgcgacacctggcaggccgacgtggcgcgcgat
tgccgcacgctgtccggtggcgagagttttctggtcagcctggcgctggccctggcgctg
tcggatctggtcagccacaagaccagcatcgactcgctgtttctcgacgaaggcttcggc
accctcgatggcgagacgctggaggtggcgctggacgcgctggataacctcaacgccagc
ggcaagaccatcggcgtgatcagccatgtcgaggcaatgaaggaacgcattccggtgcag
ttacgggtacacaagggcgttggcctgggttacagccggctcgacgcacgttttgcagtc
aaagaaggggcatga
DBGET
integrated database retrieval system
