Ectopseudomonas oleovorans: BN5_3521
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Entry
BN5_3521 CDS
T03772
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ppse
Ectopseudomonas oleovorans
Pathway
ppse03030
DNA replication
ppse03430
Mismatch repair
ppse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN5_3521 (holA)
03430 Mismatch repair
BN5_3521 (holA)
03440 Homologous recombination
BN5_3521 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppse03032
]
BN5_3521 (holA)
03400 DNA repair and recombination proteins [BR:
ppse03400
]
BN5_3521 (holA)
Enzymes [BR:
ppse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN5_3521 (holA)
DNA replication proteins [BR:
ppse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN5_3521 (holA)
DNA repair and recombination proteins [BR:
ppse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN5_3521 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
CDM42073
UniProt:
W6R1C6
LinkDB
All DBs
Position
3654730..3655764
Genome browser
AA seq
344 aa
AA seq
DB search
MKLAPAQLGKHLQGALAPVYAISGDEPLLCQETADAIRNACRQQGFGERQVFNAEANFDW
GNLLQAGASLSLFAEKRLLELRLPSGKPGDKGTAALLEYLARPPEDTVLLLSLPKLDGST
QKSKWAKALIDGQVSQFIQIWPVDANQLPQWIRQRLAQAGLSASADAVDMIAARVEGNLL
AAAQEVEKLKLLAEGNQVDAETVQAAVADSARFDVFGLIDCALGGDAAHALRMLEGLRGE
GVETPVILWALAREIRLLAGIAHQQSQGIPLDKAFSSARPPVWDKRRPLVSKALQRHSSK
RWGELLQQAQLIDAQIKGQAPGDPWSELAMLTLQLSGQRLRLSP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgcccccgcgcaactcggcaaacacctgcaaggcgcactggcacctgtctat
gcgatcagcggcgacgagccattgctgtgccaggaaaccgctgacgccattcgcaatgcc
tgccgccagcaggggttcggcgaacgccaggtgttcaatgccgaagccaacttcgactgg
ggcaacctgctgcaggctggcgccagcctgtcgctgttcgccgagaaacgcctgctggaa
ctgcgcctgccttccggcaagccaggcgacaagggcacagccgccctgctcgagtacctg
gcccgcccgcccgaggacaccgtcctcttgctgagcctgcccaagctcgacggcagtacg
cagaaatccaaatgggccaaggccctgatcgacggccaggtgagccagttcatccagatc
tggccggtagacgccaaccagttgccgcagtggattcgccagcgcctcgctcaggccggc
ctgagcgccagcgccgatgcggtggacatgatcgccgcgcgggtagaaggcaacctgctg
gccgccgcccaggaagtggaaaagctcaagctgctcgccgaaggcaatcaggtcgacgcc
gagaccgtgcaagcagcagtggccgacagcgcccgcttcgacgtcttcggcctgatcgac
tgcgccctcggtggtgacgccgcccatgccctgcgtatgctcgaaggcctgcgtggcgaa
ggcgtggaaaccccggtgatcctctgggcgctggcgcgcgagattcgcctgctggccggc
atcgcccatcagcagagccagggcatccccttggacaaggccttctccagcgcccgcccg
cccgtctgggacaaacgccggccgctggtttccaaggccttgcagcgtcacagcagcaaa
cgctggggcgagctgttgcagcaggcgcagttgatcgacgcacagatcaagggccaggcg
cccggcgatccgtggagcgagctcgccatgctgaccctgcaactctccgggcaacggctg
cgtctttctccgtag
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