Ectopseudomonas oleovorans: BN5_4006
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Entry
BN5_4006 CDS
T03772
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ppse
Ectopseudomonas oleovorans
Pathway
ppse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN5_4006 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppse03400
]
BN5_4006 (mutM)
Enzymes [BR:
ppse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BN5_4006 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BN5_4006 (mutM)
DNA repair and recombination proteins [BR:
ppse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN5_4006 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
CDM42548
UniProt:
W6R2V0
LinkDB
All DBs
Position
complement(4124463..4125275)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPYLEGQRVSRVIVRERRLRWPIPEDLDVRLSGQRIECVERRAKYL
LIKAEVGSLISHLGMSGSLRLVECGLAAAKHEHVDIELESGLALRYTDPRRFGALLWSED
PLRHELLSKLGPEPLGGLFEGERLFQMSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAGSISRARYLRLADEIKRILAHAIERGGTTLRDFVGGDGQPGYFQQELFAYGR
GGEFCKVCGSTLREVKLGQRASVYCPKCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagtcgaaactacccgccgcggtatcgccccctatctcgagggt
cagcgcgtcagccgcgtgatcgtgcgtgagcgccgtctgcgctggcccatccccgaagac
ctggacgtgcgtctgtccggccagcgaatcgagtgcgtcgagcgccgcgccaagtacctg
ctgatcaaggccgaagtcggcagtctgatcagtcatctgggtatgtccggcagtctgcgt
ctggtcgagtgtggcctggccgcagccaagcatgagcatgtggatatcgagctggagtcc
ggcctggcgctgcgttacaccgacccgcggcgtttcggcgcgctgctgtggagcgaagat
ccgctgcgccacgagctgctcagcaagctcggccctgagccgttgggcggattgttcgag
ggtgagcgcctgttccagatgtcgcgcgggcgcagcatggcggtcaaacccttcatcatg
gataacgccgtggtcgtcggcgtgggcaatatctacgccaccgaagcgctgttcgccgcc
ggtattgatccgcgtcgtgaggcgggctcgatttcgcgggcgcgctacctgcgcctggcc
gatgagatcaagcgcatcctcgctcatgccatcgagcgtggcggcaccaccttgcgcgac
ttcgtcggtggcgatggccagcccggctacttccagcaggagctgttcgcctacgggcgc
ggcggcgagttctgcaaggtctgcggcagcacgctacgtgaggtcaagctgggccagcgg
gcgagtgtctactgtcccaagtgccagcgctga
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