KEGG   Pseudomonas pseudoalcaligenes: BN5_4287
Entry
BN5_4287          CDS       T03772                                 
Name
(GenBank) CRISPR-associated helicase Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ppse  Pseudomonas pseudoalcaligenes
Brite
KEGG Orthology (KO) [BR:ppse00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppse02048]
    BN5_4287
Enzymes [BR:ppse01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BN5_4287
Prokaryotic defense system [BR:ppse02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    BN5_4287
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C Cas3_HD DEAD ResIII
Other DBs
NCBI-ProteinID: CDM42821
UniProt: W6R8W9
LinkDB
Position
4442675..4446025
AA seq 1116 aa
MNVLLIAQCDKRALVESRRILDQFAERRGERTWQTPITQAGLDTLRKLLKKSARRNTAVA
CHWIRGKDHSELLWIVGDASRFNAQGAVPTNSTRRDVLRKDDENDWHSAEDLHLLSTLAA
LLHDLGKASLAFQNRLKPGAPMERNLYRHEWTSLRLFQAFVGNDDDPTWLARLANPSEQD
DASWLSRLQRDGLDPDCDKPFCHLPPLAAALAWLVLTHHRLPLMPSEDTRLGSKIRHFQL
GMLKNLPGDIDASWNEHCTTQDRAQIEPYWHFPHGLPVTTERWRKRASKQAQRLLALLPR
RPQRDWLGSPYLMHLARLNLMLADHHYSSLTGPGRVQGEASYPLWANTERKSGKFNQGLD
EHLLGVEANAGLIGHRLADFERSLPRLSRHKGLKKRSGNERFRWQDKAFDLAAGMREQAA
RHGAFIVNMASTGCGKTLGNARIMYALSDPERGMRCAFALGLRSLTLQTGRAFRQRLRLD
EDDLAIRVGGAANSTLFEHQQALAERSGSASSQALFEDDGHVRFDGNVDAHPLLNKVIHE
PQVRALLIAPVLVCTIDHLTPATESQRGGRQIAPMLRLMSGDLVLDEPDDFDIADLPALA
RLVHWAGLLGSRVLLSSATLPPALIQGLFEAYRAGRVEYQHHRGERPGELSAIACAWVDE
QRQSRLDCSDSASFSAAHLDFAQRRHAWLATQPTRRQAQLLPLRFASQRPEEIRQAFAEQ
ILTAARSLHDTNATTDPHSGKRVSFGMVRMANIEPLFDVALALFRLGAAAGTRIHLCVYH
SQFPLLLRSAIESRLDATLKREQPDAVFALPEIRQRLERFDEPEQLFIVLGSPVTEVGRD
HDYDWALVEPSSMRSLIQLTGRVRRHRPEPWSTTNVQIFDSNLRHAERRDQPAFCKPGFE
TEHPWRLNSHRLDRLLEAEQYQRIDARPRILERPAPLDAKGNLVDLEHARLQGWMLQPAA
PDPATLSERERRRQSSQPREMNAHDGWSQPLLHLTALAQQQQPFRLDTQPKVELILLPDE
DDEDYQLHRIDPGQRRYEQIYVPVENSLHQRIADSELAGPRISPWGATDYLQALSELAQE
LDMSLEGCAKRLGTVSLPESERGWRFHPALGFAKRR
NT seq 3351 nt   +upstreamnt  +downstreamnt
atgaatgtgctgctgatcgcccagtgcgacaaacgcgccctggtggagagccggcgcatc
ctcgaccagttcgccgagcgccgcggcgagcgcacctggcaaacgccgatcacccaggcc
gggctggataccctgcgcaagctgttgaagaagagcgccaggcgcaataccgccgtggcc
tgccactggatccgcggcaaggatcacagcgaactgctgtggatagtcggcgatgccagc
cgcttcaacgctcagggcgcggtgccgaccaacagcacccgccgcgacgtattgcgcaag
gatgacgagaacgactggcacagcgccgaggatcttcacctgctcagcaccctggccgcg
ctactgcatgatctgggcaaagccagcctggccttccagaatcgcctcaaacctggcgcg
cccatggagcgcaacctgtatcgccacgaatggacatcgctgcgtctgttccaggccttc
gtcggcaacgacgacgacccgacctggctggcgcgcctggccaaccccagcgagcaggat
gacgccagctggttgagccgcctgcaacgcgacggcctcgaccccgactgcgacaagccc
ttttgccacctaccgcccctggccgccgccctggcctggctggtactgacccatcaccgc
ctgcccctgatgcccagcgaggacacgcgcctgggcagcaagatccgccacttccagctc
ggcatgctgaagaacctgccaggagatatcgacgccagctggaacgagcactgcaccacc
caggacagggcgcagatcgaaccttactggcacttcccccacggcctgcccgtgaccacc
gagcgctggcgcaaacgggccagcaagcaggcccaacgtctgctcgccctactgccacgc
cgcccacagcgcgactggctgggcagcccctacctgatgcacctggcacgcctgaacctg
atgctcgccgatcaccattattccagcctcaccggcccaggccgggtgcagggcgaggcg
agctatccgctgtgggccaataccgagcgcaaaagcggcaagttcaaccagggtctcgac
gaacatctgctgggggtcgaggccaatgccgggctgatcggccatcgcctggccgacttc
gagcgcagcctgccacgcctgagccggcacaagggcttgaagaagcgcagcggcaacgaa
cgctttcgttggcaggacaaggccttcgacctggccgccggcatgcgcgaacaggctgct
cggcacggtgcgttcatcgtcaatatggcctccaccggttgcggcaagaccctgggcaat
gcacgcatcatgtatgccctgagcgaccccgagcgcggcatgcgctgtgccttcgccctt
ggcctgcgcagcctgaccctgcaaaccgggcgcgccttccgccaacgccttcgactggac
gaggatgacctggccattcgcgtcggtggcgcggccaacagtaccttgttcgagcaccag
caggcgctcgccgaacgcagcggctcggcctccagccaggcactgttcgaagacgatggt
catgtacgcttcgacggcaatgtggacgcccatccgctgctcaacaaggtgatccacgaa
ccccaggtgcgcgccctgctgatcgcgccggtactggtctgcaccatcgaccacctgacc
cctgccaccgagagtcagcgcggcgggcgacagatagcgcccatgttgcgcctgatgagc
ggcgacctggtgctcgacgagccggacgatttcgatatcgccgacctgccggccctggcg
cgcctggtgcattgggccgggctgctgggcagccgcgtgctactgtcctcggccaccctg
ccgcctgccctgatccagggtttgttcgaggcctatcgcgccgggcgtgtcgagtatcag
catcatcgtggcgaacgccctggcgagctgtcggccatcgcctgtgcctgggtcgatgaa
cagcgacaaagccgcctggactgtagcgacagcgccagtttcagcgccgcccacctggac
ttcgcccaacgccgccacgcctggctcgcgacgcagcccacgcgccgccaggcgcaactg
ctgccgctgcgctttgccagccagcgcccggaggagattcgccaggctttcgccgagcag
atactgaccgccgcccgcagcctgcacgacaccaacgccacaaccgacccgcacagcggc
aagcgcgtaagcttcggcatggtacgcatggccaatatcgagcccctgttcgatgtggcc
ctggcgttgttccgtctgggtgcggccgccggcacgcggattcacctgtgcgtctaccac
tcgcaatttcctttgctgctgcgctcggccatcgagagtcggctggatgccaccctcaaa
cgtgagcagcccgatgcggtattcgcactgccggagattcgccaacgcctggagcgcttc
gacgagccggagcagctgtttatcgtgctcggctcgccggtcaccgaagtgggccgcgac
catgattacgactgggcactggtcgaaccctcctccatgcgctcgctgatccagttgacc
gggcgcgtgcggcgccatcgccccgagccctggagcacaaccaatgtgcagatattcgac
agcaacctgcgccatgccgaacggcgcgaccagccagctttctgcaaacccggtttcgag
acggaacacccctggcggctgaacagccatcgtctggacaggctgctggaagccgagcaa
taccaacggatcgacgcccgcccgcgcattctcgaacgccccgcgccactggatgccaag
ggcaacctggtcgatctggaacacgcgcgcctgcaaggctggatgctgcaacccgccgca
cccgatccggccacgctgtcagagcgcgaacggcggcggcaaagcagccagccgcgtgaa
atgaatgcccatgacggctggagccagccgctgttgcacctcacggccctggcccagcag
caacaaccctttcgcctcgacacccagccaaaggtcgagctgatcttgctgccggacgaa
gacgatgaggattaccagctacaccgcatcgaccccggccagcgccgctacgagcaaatc
tacgtgccggtggaaaacagcctgcaccagcgcatcgccgacagcgaactggccggaccg
cgcatcagcccctggggtgctaccgactacctccaggccttgtctgaactggcacaggag
ctggacatgagtctggagggctgcgccaagcgcctcggcaccgtcagtctgcccgagagc
gagcgcggctggcgctttcaccccgcgctgggctttgccaaacgcaggtga

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