Penicillium psychrofluorescens: 300787526
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Entry
300787526 CDS
T11417
Symbol
PFLUO_LOCUS1966
Name
(RefSeq) uncharacterized protein
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ppsf Penicillium psychrofluorescens
Pathway
ppsf03018
RNA degradation
ppsf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
300787526 (PFLUO_LOCUS1966)
09123 Folding, sorting and degradation
03018 RNA degradation
300787526 (PFLUO_LOCUS1966)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsf03019
]
300787526 (PFLUO_LOCUS1966)
03041 Spliceosome [BR:
ppsf03041
]
300787526 (PFLUO_LOCUS1966)
Messenger RNA biogenesis [BR:
ppsf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
300787526 (PFLUO_LOCUS1966)
mRNA degradation factors
5'-3' decay
Lsm complex
300787526 (PFLUO_LOCUS1966)
Spliceosome [BR:
ppsf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
300787526 (PFLUO_LOCUS1966)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
300787526
NCBI-ProteinID:
XP_073636052
LinkDB
All DBs
Position
1:<5173236..>5173587
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AA seq
80 aa
AA seq
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MENGPSSEGKDPSAFLGEIIGAPVIVKLNSGVVYKGELQSVDGYMNIALENTEEFVNGKL
RRKYGDAFVRGNNVLYISSS
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggcccttcctccgaggggaaagacccatcggcattcctgggcgaaatcatc
ggcgcgccagtgattgtgaaactgaactcgggcgtggtctacaaaggcgagttgcaatct
gtcgatggctatatgaatatcgccttggagaatacagaggaattcgtgaatgggaagctg
cggcgcaaatacggcgacgcctttgtccgggggaacaacgtgctttacatctcttccagt
tga
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