Penicillium psychrofluorescens: 300789785
Help
Entry
300789785 CDS
T11417
Symbol
PFLUO_LOCUS4
Name
(RefSeq) uncharacterized protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
ppsf Penicillium psychrofluorescens
Pathway
ppsf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
300789785 (PFLUO_LOCUS4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppsf03036
]
300789785 (PFLUO_LOCUS4)
03400 DNA repair and recombination proteins [BR:
ppsf03400
]
300789785 (PFLUO_LOCUS4)
Chromosome and associated proteins [BR:
ppsf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
300789785 (PFLUO_LOCUS4)
DNA repair and recombination proteins [BR:
ppsf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
300789785 (PFLUO_LOCUS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
HDA2-3
VitK2_biosynth
Motif
Other DBs
NCBI-GeneID:
300789785
NCBI-ProteinID:
XP_073634103
LinkDB
All DBs
Position
1:<72996..>76537
Genome browser
AA seq
1145 aa
AA seq
DB search
MSSVGADEARRLRTLKADVRDQDDLERDITRQADKALAERAEENDTKRLEKALNEKARVE
SQMRTAQHRLQQPVGAVTRRRIENELRGLEVRKNGLAKDVIEIQKRIDERREKQENPTAV
TGSGRQPNESRRDYLIRTGKITPFAAVNTDSNNGPLANLHDALIDVEDRYDEDEERDQLK
DQPTASHVHLARPGFGFDEVSADSRSDSTVSGKGKRRKLDSSPEAKKRPRTRVSTSPSAD
SSASYVASEDADDVSEGDDFMPDTVPEPMSISKRKKDVSGEKLEDFSGVDDGNETIYQSR
LTKWISKRSSARKRAQKETLVKDEYEDDEEWLKPHPTIPDEEITNGLRIPGDINRFLFGY
QRTAVRWLWELHQQKVGGIIGDEMGLGKTIQAIAYLASLHHSKMFDKPALVVCPATLMEQ
WVNEFHRWWPPFRVSILHSSGSGMVNLGKETTREEALTAELMGSYHSRHLSSSQKPAKKI
INRVVEEGHVLVTTYSGLQSYADVLVGVEWGCAILDEGHKIRNPDAGITFSCKELRTPHR
IILSGTPMQNSLVDLWSLFDFVFPMRLGNLVNFKSQFEIPIRQGGYASASNLQVQTATKC
AETLKDAISPYLLQRFKADVAKDLPQKSEQVIFCNLTQWQRTIYRRFLESDDMKSIHLGK
RNALFGIDLLRKICNHPDLADHALRSKEADYGNSERSGKMQVLKGLLEVWRDTRHKTLLF
AQTRQVLDILEKFIRWLGDFNYRRMDGTTPIKDRQSLVDRFNTDPSVHVFLLTTKVGGIG
INLTGADRVIIYDPDWNPSTDMQARERAWRLGQKRDVTIFRLMTKGTIEEKIYHRQIFKQ
FLTNKITRDPQSREGFNLSDLYDLFTLSDEHEKGLETTKLFKDAQVTYREEPKNELAKPH
AGQPKPLPESLKEDDINAVPGVVTIEEFKNDSEDPEKEGNVKNAEDRIMQGIFARSNVHA
ALEHEEIVNGKRKVRADPKMVEAEARRVANEAAEELRKAGETARTVPIGLPTWTGQFGVA
GRNRSGGSSSSARPAGAGPSSASLVANLNPRASVRSADSSSPAPTRMPRGKDFLAMIRDY
IASCRGPVYSQMLIDEFSHYCNTPQRIAEFQEMLKKVATLSRAADGRGKWTLNPEFTRKH
PAGRR
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagttggcgctgacgaggctcgtcgccttaggacgctgaaggcggatgtgcgc
gaccaggatgaccttgagagagacatcacccgtcaggcagataaggctctcgcggagaga
gccgaggaaaatgacaccaagcggctagagaaggcactcaacgaaaaggcgagagtcgag
tctcagatgcggaccgcgcagcatcgtctacagcagccagttggagctgtcacccggcgc
cgcatcgaaaacgagctgcgaggactagaggtgcgcaagaacggtctggccaaggatgtg
atagaaatccagaagcgcatcgacgagagacgcgagaaacaggaaaatcccacagcggtc
acgggctcgggacggcagccgaacgagtctcgtcgtgactacctcatccgcactggaaaa
atcactccgttcgccgccgtgaacacggattcgaataatggaccgcttgccaacctacat
gatgccctaatcgatgttgaagatagatatgacgaagacgaggagcgtgaccaattgaag
gaccaacctaccgcatcacatgtgcacctggcgcggcccgggtttggctttgatgaagtc
agtgcggacagtcgttctgatagcaccgtatctggtaaaggaaagcgacggaagctcgat
tcaagcccagaggcgaagaaacggcccaggactcgtgtgtccacttctcccagtgcggat
tcttctgcgagctatgttgcctcggaagatgccgatgatgtgtctgagggggacgacttt
atgccagacactgtccccgagcccatgtctattagcaagcgtaaaaaggacgtgtctggt
gaaaagctggaggacttcagcggtgttgatgacggcaacgaaaccatttatcaatctcgt
ctcaccaagtggatcagcaaacgcagcagtgcccgcaagcgtgcccagaaggagactctg
gttaaagatgaatatgaggacgacgaggaatggctcaaaccgcatccaaccatacctgat
gaggagattacgaacggacttcgcattcctggcgacatcaatcgtttcctctttggctac
caacgaactgccgtccggtggctttgggagctccaccaacaaaaggtgggggggataatc
ggagatgagatgggtctcggcaagacgattcaagccattgcttatctggcatcattacac
catagcaagatgttcgataagcctgctctggttgtctgtcctgcaacactcatggagcag
tgggtcaatgaatttcatcgttggtggccgcctttccgtgtctccattctacactcgtct
ggcagcggtatggtcaatctcggcaaggaaaccacccgcgaggaagcacttacggccgag
ttgatgggcagctaccattcgcgccatttgtcttccagccaaaagcccgcgaaaaagatc
atcaaccgagtggttgaggaagggcacgttcttgttaccacttattctggcttgcaatct
tatgcggatgttcttgttggtgttgaatggggttgcgccatcctcgatgagggccacaaa
attcggaatccagacgctggtatcaccttcagttgtaaagagcttcgtacccctcatcgc
atcatcttatcaggaacgcctatgcagaacagcttagtcgatctatggtccctattcgac
tttgtctttccgatgcgactagggaatttggtgaactttaagagccagtttgaaatccca
atccgccagggcggatatgcctctgcaagcaacctccaggtccagaccgctaccaagtgc
gcggaaaccctaaaagatgccatcagcccttatctgctccagcggttcaaggccgatgtt
gcgaaagacctcccacagaagagtgaacaggtcatcttctgcaatctgacacagtggcag
cgaaccatctaccgtcggttcctagaatcggatgacatgaagtccattcatctaggcaag
agaaatgcccttttcggcattgatcttcttcgcaaaatctgcaaccacccggacctagca
gaccacgcgctacgatcaaaagaagcagattacggcaatagtgagcgctcgggcaagatg
caggtactcaaaggtctcttagaagtatggcgtgacaccagacacaagactttattgttc
gcacagactcgccaggtgctagatattttggaaaagttcattcggtggttgggcgatttt
aattaccgcagaatggatggcactactccgatcaaggatcgccagagcctggtcgatcgg
tttaacacagaccctagtgtccatgtgttcttactcactaccaaagtcggaggtatcgga
atcaaccttactggcgctgaccgggtaatcatttatgaccctgactggaatccctctact
gacatgcaggcgcgcgagcgagcatggcggctaggccagaaacgcgacgtcacaatcttc
cgccttatgaccaaaggcaccattgaagagaagatttatcacagacagatcttcaaacaa
ttcttgaccaacaaaatcacgcgtgacccgcaatcacgggaagggttcaatctcagtgac
ctctatgacctgtttactctctcggatgagcatgaaaagggcctggagactacaaagcta
ttcaaagatgcgcaggttacctaccgcgaagaaccaaagaatgaactcgctaaacctcat
gcgggtcaacccaaacccctccccgagtctttgaaagaagacgatatcaacgctgtcccg
ggcgttgtcaccattgaagaattcaagaacgactccgaggaccctgagaaagagggcaat
gtcaagaacgccgaggaccggatcatgcaaggcatattcgcccggtcgaatgtgcacgcc
gcgctcgagcacgaggagatcgtcaacggcaaacgcaaagtgcgcgctgatcccaaaatg
gtcgaagccgaagcccgccgtgtcgccaatgaagccgccgaagagctgcgcaaagccggc
gagactgctcgcaccgtcccgatcggtttgcccacatggactggccagtttggtgtcgcg
ggccgtaaccgatccggcgggagcagcagctcagcgcgtcctgccggcgcggggccatcg
tctgcgagtctcgttgccaatctcaaccctcgcgcttcggtgcggtctgccgattcctct
tctcctgcgcccacgcgcatgccgcgcggcaaggactttctggccatgatccgggactac
attgcctcctgtcgcgggccagtctactcgcagatgctcatcgacgagtttagccactac
tgcaatacaccgcagcggatcgcagagttccaggagatgctgaaaaaggttgctacactt
agccgtgcggcggatggacggggcaagtggacgttgaacccggagtttactaggaagcat
cctgcagggaggaggtag
DBGET
integrated database retrieval system
