Penicillium psychrofluorescens: 300789815
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Entry
300789815 CDS
T11417
Symbol
PFLUO_LOCUS4025
Name
(RefSeq) uncharacterized protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ppsf Penicillium psychrofluorescens
Pathway
ppsf03018
RNA degradation
ppsf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
300789815 (PFLUO_LOCUS4025)
09123 Folding, sorting and degradation
03018 RNA degradation
300789815 (PFLUO_LOCUS4025)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsf03019
]
300789815 (PFLUO_LOCUS4025)
03041 Spliceosome [BR:
ppsf03041
]
300789815 (PFLUO_LOCUS4025)
Messenger RNA biogenesis [BR:
ppsf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
300789815 (PFLUO_LOCUS4025)
mRNA degradation factors
5'-3' decay
Lsm complex
300789815 (PFLUO_LOCUS4025)
Spliceosome [BR:
ppsf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
300789815 (PFLUO_LOCUS4025)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
300789815
NCBI-ProteinID:
XP_073638100
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All DBs
Position
2:complement(<4916570..>4916960)
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AA seq
104 aa
AA seq
DB search
MLVELKNGETLNGHLVNCDNWMNLILREVVQTSPEGDRFFRLPEVYIRGNNIKYLRIPEE
IVDQVKEQQQNQPRDRRGGREGGRDRGRGGGRGGRGRGRGRGGP
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcgagctcaagaacggcgagacactgaacggccacctggtcaactgcgacaac
tggatgaacctgatcctgcgcgaagtggtccagacaagcccggaaggtgatcgtttcttc
agattacccgaggtctacatccgtggcaacaatatcaaataccttcgcatccccgaggag
attgttgatcaggtcaaggagcagcaacaaaaccaaccacgagaccgtcgtggcggacga
gagggtgggcgcgatcgcggccggggcggtggtcgtggaggacgcgggcggggtcgtggg
cgaggcggtccatga
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