KEGG   Penicillium psychrofluorescens: 300789815
Entry
300789815         CDS       T11417                                 
Symbol
PFLUO_LOCUS4025
Name
(RefSeq) uncharacterized protein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
ppsf  Penicillium psychrofluorescens
Pathway
ppsf03018  RNA degradation
ppsf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppsf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    300789815 (PFLUO_LOCUS4025)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    300789815 (PFLUO_LOCUS4025)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsf03019]
    300789815 (PFLUO_LOCUS4025)
   03041 Spliceosome [BR:ppsf03041]
    300789815 (PFLUO_LOCUS4025)
Messenger RNA biogenesis [BR:ppsf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     300789815 (PFLUO_LOCUS4025)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     300789815 (PFLUO_LOCUS4025)
Spliceosome [BR:ppsf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    300789815 (PFLUO_LOCUS4025)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 300789815
NCBI-ProteinID: XP_073638100
LinkDB
Position
2:complement(<4916570..>4916960)
AA seq 104 aa
MLVELKNGETLNGHLVNCDNWMNLILREVVQTSPEGDRFFRLPEVYIRGNNIKYLRIPEE
IVDQVKEQQQNQPRDRRGGREGGRDRGRGGGRGGRGRGRGRGGP
NT seq 315 nt   +upstreamnt  +downstreamnt
atgctggtcgagctcaagaacggcgagacactgaacggccacctggtcaactgcgacaac
tggatgaacctgatcctgcgcgaagtggtccagacaagcccggaaggtgatcgtttcttc
agattacccgaggtctacatccgtggcaacaatatcaaataccttcgcatccccgaggag
attgttgatcaggtcaaggagcagcaacaaaaccaaccacgagaccgtcgtggcggacga
gagggtgggcgcgatcgcggccggggcggtggtcgtggaggacgcgggcggggtcgtggg
cgaggcggtccatga

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