Penicillium psychrofluorescens: 300790201
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Entry
300790201 CDS
T11417
Symbol
PFLUO_LOCUS4373
Name
(RefSeq) uncharacterized protein
KO
K12856
pre-mRNA-processing factor 8
Organism
ppsf Penicillium psychrofluorescens
Pathway
ppsf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
300790201 (PFLUO_LOCUS4373)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppsf03041
]
300790201 (PFLUO_LOCUS4373)
Spliceosome [BR:
ppsf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
300790201 (PFLUO_LOCUS4373)
Complex C
U5 SnRNP specific factors
300790201 (PFLUO_LOCUS4373)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
Motif
Other DBs
NCBI-GeneID:
300790201
NCBI-ProteinID:
XP_073638443
LinkDB
All DBs
Position
3:complement(<654069..>661186)
Genome browser
AA seq
2353 aa
AA seq
DB search
MASLPPPPPPPGWGAAPPSMPMAPPPPGYQPPADPTVAKFAQKKNEWLRTQRNRFGEKRK
GGFVETQKADMPPEHLRKIVRDIGDVSQKKFANEKRSYLGALKFMPHAVLKLLENMPMPW
ESAREVKVLYHVNGCLTLVNETPRVIEPVFHAQWATMWMCMRREKSDRRHFKRMRFPPFD
DEEPPLSWSENIEDVEPLEPIQMELDESEDSPVYEWFYDHRPLLDTSHVGGPSYKKWNLS
LPQMATLYRLSHQLLSDVVDENYHHMFDLNSFFTAKALNVAIPGGPRFEPLYKDIDPNDE
DFSEFNAIDRIIFRAPIRTEYRVAFPFLYNTLPRSVKVSWYSHPQVVYVRTEDPNLPAFY
FDPVINPISSRSVKPKNITVSHEDEIFGYGNEEDDFELPGEVEPFFEDEELYTTETASAI
ALWWAPHPFDKRSGKMVRAQDVPLVKQWYLEHCPQGQPVKVRVSYQKLLKTYVLNELHKK
KPKAQSKQNLMKTLKSTKFFQQTTIDWVEAGLQVCRQGFNMLNLLIHRKNLTYLHLDYNF
NLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLGNIDAFQLADGILYAF
NHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNSGPVGKGPGCGFWAPAWRVWLFFMR
GIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMADLMDMMPEGIK
QNKVNVVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKSKADWWISVAHYNRERIR
RGATVDKTVAKKNLGRLTRLWLKSEQERQHNYLKDGPYVSSEEAVAIYTTMVHWLESRKF
SPIPFPSVSYKHDTKILILALERLRESYSVKGRLNQSQREELALIEQAYDSPGTTLARIK
RFLLTQRAFKEVGIDMNDNYNNINPVYDIEPIEKITDAYLDQYLWYQAEQRHLFPAWIKP
SDSEVPPLLAYKWTQGINNLSNVWESDEGETNVMIETELSKVYEKIDLTLLNRMLRLIMD
HNLADYITSKNNVQLSYKDMNHTNSYGLIRGLQFSGFVFQYYGMMIDLLLLGLQRASEMA
GPPASPNDFLQFRDRPTETRHPIRLYTRYVDKIWVFFRFSADESRDLIQRFLTENPDPNF
ENVIGYKNKKCWPRDCRMRLMRHDVNLGRAVFWDMKNRLPRSITTIDWDDTFASVYSKDN
PNLLFSMGGFEVRILPKIRNQNEEFSVKDSVWSLVDNTTKERTAHAFLQVTEEDIQKFNN
RIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVNLLDTIVKCETKIQTRVKIG
LNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPTSDKRWSKQTDTGITHFRAGMSHDEE
TLIPNIFRYIIPWEAEFIDSQRVWMEYSQKRMEAQQQNRRLTLEDLEDSWDRGLPRINTL
FQKDRSTLSFDKGFRLRAEFKQYQLMKSNPFWWTSQRHDGKLWNLNAYRTDVIQALGGVE
TILEHTLFKATAFPSWEGLFWERASGFEESMKFKKLTNAQRSGLNQIPNRRFTLWWSPTI
NRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELE
QLGVEAVQKETIHPRKSYKMNSSCADILLFATNKWNVTRPSLLFDTKDVYEPNTTNKFWL
DVQLRYGDYDSHDIERYVRAKYLDYTTDSMSIYPSATGLMIGIDLAYNLYSAYGQYFPGL
KTLIQQAMAKVMKANPALYVLRERIRKGLQLYASESNQEFLNSQNYSELFSPQIQLFIDD
TNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTA
EEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVHLLDFPNISIRASELQLPFQAAMKVEKL
ADMILRATEPQMVLFNLYDEWLKSISPYTAFSRLILILRALHVNIDKAKILLRPDKTVIT
QEHHIWPSLSDEDWIKVEVQLRDLILNDYGKKNNVNVQSLTSSEVRDIILGMEISAPSLQ
RQQAAEIEKQQEEAKQLTAVTTKTQNVRGEDIIVTTTSQYEQQSFASKTEWRTRAIATSN
LRTRSNNIYVSSDDIREEGYTYIMPKNVLKRFITIADLRVQVSGYIYGSSPPDNEQVKEV
RTIVMIPQVGNTRDVQLPHQLPQHDYLNGLEPLGVIHTVSGNEPPYMSAMDVTQHARLMN
AHPSWDKKTVTMTVSFTPGSVSLAAWGLTPTGYKWGAENKDMSSDQPQGFATNMGEKCQL
LLSDKIRGYFLVPEDNVWNYSFMGSSFGSVEKRPVYVKIDTPLRFYDDQHRPLHFQNFAE
LEDIWVDRSDNFE
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttgccgcctccccctcctcctccaggatggggcgcagctcctccttcgatg
cccatggcaccgccgccgccagggtaccagccgcccgccgatccgaccgtcgcaaaattt
gcgcagaagaagaacgagtggctgcgcacgcaacgcaatcgcttcggcgaaaagagaaag
gggggtttcgtcgagacgcaaaaggcagacatgccgccggagcatctacgcaaaatcgtg
agggatatcggtgatgtctcgcagaagaaattcgccaacgagaagcgcagctatcttggc
gcgctcaagttcatgccccacgcggtgctcaagcttctggagaacatgcccatgccctgg
gaatctgcaagagaagtcaaggtgttgtatcacgtcaacgggtgcctcaccttggtgaac
gagaccccacgcgtcatcgaacccgtgttccatgcacagtgggcgacgatgtggatgtgc
atgcgtcgggagaagagcgatcgtcgacacttcaagcgcatgcgtttccctccctttgac
gatgaagaaccgccgctatcctggtctgagaatatcgaggatgtggagcccctcgaaccc
atccagatggagctcgatgaatccgaagattccccggtatacgagtggttctacgaccac
cgccctctccttgatacgtcccacgtcggtggcccaagctacaagaagtggaatttgtcg
cttcctcagatggcgaccctgtatcgcctgagtcatcagctgctcagcgatgtcgtcgat
gaaaactatcaccacatgttcgacctgaacagcttcttcactgccaaggccctgaacgtt
gcgatccccggtggtccccgtttcgaacccctctataaggacatcgaccccaacgacgag
gatttcagcgagttcaacgccatcgaccgcatcatcttccgcgctcccattcggaccgag
taccgagtggcgttcccgtttctgtacaatacccttccacggagcgtcaaggtctcctgg
tactctcaccctcaggtggtctatgttcggaccgaagatcccaacctgcctgcattctac
ttcgaccccgtcatcaaccccatctcctctcgttccgtcaagcccaagaacatcacggtc
agccacgaagacgaaattttcggatatggcaatgaggaggatgactttgagctaccggga
gaagttgaaccgttcttcgaggacgaggaactttacaccacggagaccgcgtctgctatc
gctctgtggtgggcccctcacccgtttgacaagcggtccggcaagatggttcgtgcccag
gacgtgccgctggtgaaacagtggtatctggaacactgcccgcagggtcaacctgtcaag
gttcgggtatcataccaaaagcttctcaagacttacgtgctcaacgagcttcacaagaag
aagccaaaggctcagagcaagcagaacctgatgaagactttaaagtcgaccaagttcttc
cagcagacgaccatcgactgggttgaggccggtctacaggtctgccgccagggtttcaac
atgctgaacctgctcatccaccgcaagaacctgacctacttgcatctcgactacaacttc
aacctgaagcccgtcaagaccctgaccaccaaggagcgaaagaagtcccgcttcggaaac
gcgtttcacttgatgcgagaaattctgcgcctgaccaaactgattgtcgatgcccaggtc
caatatcgtctgggcaacatcgacgctttccagttggcggatggcatcctctatgccttc
aaccacgttggtcagctcaccggtatgtaccggtacaagtacaagttgatgcaccagatc
cggtcgtgcaaagatctgaagcacctcatctactaccgtttcaactccggtcccgtcggc
aagggtcctggctgcggtttctgggcgcctgcctggcgagtctggctgttcttcatgcgc
ggtatcatccctctgctggagcggtggctcggaaacctgctttctcgtcagttcgagggc
cgccacagcaagggtgtagccaagaccgtgaccaagcagcgtgtggaatcccatttcgat
ttggaactccgcgcatctgtgatggcagatcttatggacatgatgcccgagggcattaag
cagaacaaggtcaatgtcgtcctgcaacatctgtctgaggcatggagatgctggaagagt
aacatcccttggaaggttccgggtctgcctgctccgattgagaacatcatccttcgatat
gtcaagagcaaggctgactggtggatttcggttgctcactataatcgcgagagaattcgt
cgtggtgccaccgtcgacaagacagtcgccaagaagaacctgggtcgtcttacccgtctt
tggctgaagtccgagcaagaaaggcagcacaattacttgaaagacggcccgtacgtttca
tccgaggaggcagttgccatttacacgaccatggtccactggctggagtctcgcaaattc
tctccaattccgttccccagtgtctcgtacaagcacgacacgaagatccttattctggct
ctggaacgactgcgcgaatcatactccgtgaagggccgactgaaccagagccagcgcgag
gaactcgcgctcatcgaacaggcttatgactctcctggaaccaccctggcgagaatcaag
cgtttcctcctgacccagagagcctttaaagaggttggcattgatatgaatgacaactac
aataacatcaaccctgtctacgacattgaacccatcgaaaagattaccgatgcttacctg
gatcaatacctctggtaccaagcggagcagcgccacctcttccccgcctggattaagccc
tcagattcggaagtgcctccccttttggcttacaagtggacccaaggtattaacaacttg
tccaacgtctgggagagtgacgagggcgagaccaacgtcatgattgagaccgagttgtcc
aaggtctacgagaagatcgacctgacccttttgaaccgaatgcttcgtctgatcatggac
cacaacttggcagactacatcacctccaagaacaatgtccagctgagctacaaggatatg
aaccacacaaacagttacggactgatccgtggtcttcagttttcggggttcgtgttccag
tactacggcatgatgattgacttgttgctcctcggcctccagcgagccagcgagatggcc
gggccgcccgcgagccccaatgacttcctgcaattcagagaccgtccgaccgagaccagg
catcctatccgtctctacacccgttacgtcgacaagatctgggtcttcttccgattctcc
gcggatgagtcccgagacttgatccagcgtttcttgaccgagaatccagacccgaacttt
gagaacgtcattggttacaagaataagaagtgctggcctcgtgattgtcggatgcgcctg
atgcgccacgatgttaacctgggacgtgccgtgttctgggatatgaagaatcgtctcccc
agatctatcacaaccatcgactgggatgacacgtttgctagcgtctacagcaaggacaac
cctaacttgctgttctctatgggtggattcgaagttcgtatccttcctaagattcggaat
cagaatgaggagttctcggtcaaggacagcgtgtggtctctggtcgacaacacaaccaag
gaacggacggcccatgccttccttcaggtcaccgaagaggacatccagaagttcaacaac
cgtatccggcaaatcctcatgtcctctggatcgacgactttcaccaagatcgctaacaag
tggaacacggcgctgattgctctcttcacctattaccgtgaggctgctgtttcgaccgtc
aaccttcttgacaccattgtcaagtgcgagacaaagattcaaacccgtgtcaagattgga
ttgaactccaagatgccttcgcgtttccctccggctgtgttttatactccgaaggaattg
ggtggtctgggtatgatctccggatctcacatcctcatccccaccagcgacaagcgttgg
tcaaagcaaacggacacgggcatcacccacttccgggcaggtatgtctcacgacgaagag
actctgatccccaacatcttccgatacatcattccctgggaagccgagttcatcgactcg
cagcgcgtgtggatggagtactcccagaagcgaatggaggcccaacagcagaaccggcgc
ttgacgttggaggatctggaagacagctgggaccgtggtctgccacgtatcaacacgctt
ttccaaaaggaccgaagcaccctcagcttcgacaagggattccgacttcgcgcggagttc
aagcagtaccagctgatgaagagcaatccgttctggtggactagccaaaggcacgatggc
aagctttggaatttgaacgcttaccggacggatgtcattcaggccctaggtggtgtagag
accattctggagcacaccctattcaaggcgacggctttcccatcttgggagggtctgttc
tgggagagagcatcaggctttgaggagtcgatgaaattcaagaagcttaccaacgctcag
cggtctggtttgaaccagattcccaaccgtcgtttcaccctctggtggtcccccacgatc
aaccgtgccaacgtctatgttggtttccaggtgcagctggatctcaccggtatcttcttg
cacggcaagatcccaaccctgaagatctctttgatccagatcttccgtgcccacttgtgg
cagaagatccacgagtccgtggtcatggacttgtgtcaggtttttgaccaagaactggaa
cagcttggtgtcgaggcggtccaaaaggagacgattcatccacgtaaatcttacaagatg
aacagttcttgcgcggatatccttctcttcgcgaccaacaagtggaacgtcacccggcct
tctctgttgttcgatacgaaggacgtctacgaacccaacacgacgaacaagttctggctt
gatgtgcagctgaggtatggcgactacgattcacacgatattgaacgctacgtccgtgcc
aagtatctcgactacaccaccgacagcatgagcatctatccttccgccaccggtctgatg
atcggcatcgaccttgcctacaacctgtactcggcttacggccagtacttcccgggcctg
aagactttgatccagcaggccatggccaaggttatgaaagcgaacccggctttgtacgtg
ctgcgtgagcgtatccgcaagggtctgcagctgtacgcttcagagagcaaccaggagttc
ctcaactcgcagaactactcggagctgttcagtccgcagattcagctgttcatcgatgac
accaatgtctaccgtgtcacgatccacaagacgttcgaaggtaacttgaccacaaagccc
atcaacggtgcaatcttcatcttcaatccccgaactggacagctgttcttgaagatcatt
cacaccagcgtgtgggctggccagaagcgtcttggtcaattggccaaatggaagacagcc
gaagaagtggcggctttgattcggtctctgcctgtggaagagcaaccgaagcagctcatc
gttacccggaagggtctgcttgatcctctcgaggtccaccttcttgatttccccaacatc
tccatccgtgcgtccgagctccagcttcctttccaggctgccatgaaggttgagaagctt
gcggacatgattctacgcgcgactgagcctcagatggttctcttcaacctgtacgatgaa
tggttgaagtccatctccccatacaccgcgttctcccgattgattctcattctgcgtgcg
ctgcatgtcaacattgacaaagctaagatcctcctgcggcccgataagaccgtgatcact
caagagcatcacatctggccatctctctcggacgaggactggatcaaggtggaagtgcag
ctgcgtgacctgatcttgaacgactacggaaagaagaacaatgtcaacgtgcagagtttg
accagcagtgaagtccgagatatcatcttgggtatggagatcagcgccccatctctgcag
cgacagcaggctgcagagattgagaagcagcaggaggaggcgaagcaactcactgccgtc
acgaccaagacgcagaacgtgcgtggagaggacatcattgtcaccaccacttcccagtat
gaacagcagtcgtttgcctcgaagacggagtggcggacccgcgccatcgcgacctcgaac
ctccggacgcgatcgaacaacatctacgtctcctctgacgacatccgcgaggagggctac
acctacatcatgcccaagaacgttctcaagcgattcatcacgatcgccgatctccgtgtg
caggtttctggatacatctatggcagctctccccccgacaacgaacaggtcaaggaggtt
cgcactatcgtgatgattccccaggtcggaaacacccgggatgtgcaactgccgcatcag
ctgccccagcacgactacctgaacggtctggagccgctcggtgtcatccacacggtttcg
ggcaatgagccaccctacatgtccgcgatggatgtcacacagcacgcgcgtctcatgaac
gcacacccctcgtgggacaagaagaccgtgaccatgaccgtttcgttcacaccagggtcc
gtctcactcgccgcttgggggctcactcctacgggctacaagtggggcgccgagaataag
gacatgagttcggatcagccgcagggcttcgccaccaacatgggtgagaagtgccagctg
cttctcagtgacaagatccgcggctatttcctcgtccccgaggacaatgtctggaactac
agctttatgggtagctccttcggcagcgtggaaaagaggcccgtttacgtcaagattgac
accccgctgcgcttctatgatgatcaacatcggcctctgcatttccagaacttcgctgag
ctcgaggatatctgggtggatcggtctgacaacttcgagtga
DBGET
integrated database retrieval system