KEGG   Penicillium psychrofluorescens: 300790998
Entry
300790998         CDS       T11417                                 
Symbol
PFLUO_LOCUS5090
Name
(RefSeq) uncharacterized protein
  KO
K07573  exosome complex component CSL4
Organism
ppsf  Penicillium psychrofluorescens
Pathway
ppsf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ppsf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    300790998 (PFLUO_LOCUS5090)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsf03019]
    300790998 (PFLUO_LOCUS5090)
Messenger RNA biogenesis [BR:ppsf03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     300790998 (PFLUO_LOCUS5090)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     300790998 (PFLUO_LOCUS5090)
SSDB
Motif
Pfam: EXOSC1 ECR1_N CoV_NSP2_C
Other DBs
NCBI-GeneID: 300790998
NCBI-ProteinID: XP_073639154
LinkDB
Position
3:complement(<2547334..>2548083)
AA seq 249 aa
MAATIPSLAIPGQRLGPASAYSAGPGTHIQQSMIYASIAGPVVVDPAQPKTQLKSTIRVS
RVPTSKPQTQTDSPAGAASTLPKPKPRYNTLPAVDSIVLARVTRVQKRQVAVSILVVLDE
STTAQSIISPSSSSDNDNIASILTTAANPENHSNTDELRFQALIRKEDVRAVEKDRVVLD
EMFRVGDIVRGSVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVSWKEMRDPVTEVG
EQRKVARPF
NT seq 750 nt   +upstreamnt  +downstreamnt
atggctgccactattccctctctggctattccaggccagcgtctgggccccgcatctgcc
tacagtgccggaccgggaacacacatccagcaatccatgatctacgcctcaatcgccggt
cccgttgtcgtcgatcccgcacaacccaagacgcagctcaagtccacgatccgagtatcg
cgagtcccaacgagcaaacctcaaacgcaaaccgatagtcctgcaggagcggcatccaca
cttccaaaaccaaaaccaagatacaacaccctccccgccgtggactcgatcgtcctcgcc
cgcgtaacaagagtacaaaaacgccaagtcgccgtgtccatcttagtcgtcctcgatgag
tccaccactgcccagagcatcatctctccctcttcatcatcagacaacgacaacatcgcc
tcaatcctcacaacagctgccaacccagagaaccacagcaacacagacgaactgcgcttc
caagcgctcatccggaaagaagacgtgcgcgccgtggagaaagaccgcgttgtgctggat
gaaatgttccgcgttggcgacatcgtgcgcgggtcggtgatttcgctgggcgatcagagc
ttttattatctcactaccgcgcgcaatgatctcggcgttgttatggctcggagtgaggct
gggaatatgatgtttcctgttagttggaaggagatgcgggatccggttactgaggtcggg
gagcagaggaaggttgcgaggcctttttga

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