Penicillium psychrofluorescens: 300791070
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Entry
300791070 CDS
T11417
Symbol
PFLUO_LOCUS5156
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ppsf Penicillium psychrofluorescens
Pathway
ppsf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
300791070 (PFLUO_LOCUS5156)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsf03019
]
300791070 (PFLUO_LOCUS5156)
03041 Spliceosome [BR:
ppsf03041
]
300791070 (PFLUO_LOCUS5156)
Messenger RNA biogenesis [BR:
ppsf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
300791070 (PFLUO_LOCUS5156)
Spliceosome [BR:
ppsf03041
]
Complex B
Other components
Prp19-related factors
300791070 (PFLUO_LOCUS5156)
Complex C
300791070 (PFLUO_LOCUS5156)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
SNAP
TPR_17
Motif
Other DBs
NCBI-GeneID:
300791070
NCBI-ProteinID:
XP_073639218
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All DBs
Position
3:<2714087..>2716812
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AA seq
833 aa
AA seq
DB search
METSASRPDLYLITDQDTVYEQDLLRDAGSVKPWLAYIEFKQQHGTLYEQAFIMERACKQ
LPRSYKLWKMYLEFRTKHLKGRNPTVYRAEFLKVNALFERALILLNKMPRIWEMYLSFLM
LQPLVTQTRRTFDRALRALPVTQHNRIWRLYKGFARSASGQTAVKIWARYMQIHPENAEE
YIGLLIEMGQYTEAVKRFMEVLDNQRFQSKEGKSQFQLWTEMVDLLVSKAKKIETGPQVG
IDVDAILRSGIDKFADQRGKLWAGLATYWITKGNFEKARDVFEEGITTVMTVRDFTLIFD
SYVEFEESIIGSLMEAAAVRSEKGRVDEEADFDLDLRMLRFEQLMDRRPFLVNDVLLRQN
SNNVIEWGKRVALWGDNKQEAVQTYTAAIAAINPKKAHGKFSELWVNYAKLYENGGDLAT
ARVIFDKAVKVPFKSVAELAETWCEWAEMELRAENFDKAVSIMAKATQAPKKSTVDYFDE
SLSPQQRIHKSWKLWSFYVDLVESVSSLEETRKVYERIFELRIATPQTVVNYSNLLEENQ
YFEDSFKVYERGLDLFTYPVAFELWNLYLTKAVDRKIGIERLRDLFEQALDGCPPKFAKP
LYLMYGNLEEERGLSRHAMRIYERATRSVSDEDRFEMFEFYITKSASNFGLTSARPIYER
AVAALPDQEAKEMCLKFAEMERRLGEIDRARAIYGHASQFCDPRTNAPFWQKWEAFEVQH
GNEDTFKEMLRIKRSVQTQYNTDVNFIASQAIARSQQRPQEGEDGAPADGEDEDKDRADA
MAALERQARAPVGFVAASSGPEGGDRPKPSGQAPPAVPANPDAIDLDDEMDAE
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggaaacatctgcgtctcgcccggacctgtacttgatcactgaccaggatacggtatac
gaacaagatttgcttcgcgacgcgggtagtgtcaagccatggctggcctacatcgaattc
aagcagcagcatggcacgctctacgagcaagccttcattatggaacgcgcctgcaaacaa
ctaccacggtcgtataagttgtggaagatgtacctcgagttccggacgaagcatctgaag
ggccgaaaccccactgtataccgggccgagttcctgaaggtcaacgccctattcgaacga
gcccttatcctcctcaacaagatgcctcgcatttgggagatgtacctctccttcctgatg
ttgcaacctctcgtgactcaaactcggcggactttcgatcgtgctcttcgtgcactgcct
gtcactcagcacaaccgtatctggcgtctttacaagggcttcgcccggtctgcatccgga
caaactgccgtgaagatctgggctcggtacatgcaaattcatcccgagaacgcggaagag
tacatcgggctgcttattgaaatgggccagtacacggaagctgtgaagagatttatggag
gtcctcgacaaccagcgcttccagtccaaggagggcaaaagtcaattccagctctggacc
gagatggttgatttgctcgtgtccaaggcaaagaagatcgagaccggccctcaggttggc
attgatgtcgatgcgatccttcggagcggcattgacaagtttgccgaccagcgaggaaaa
ctctgggctggattggccacttactggatcaccaagggaaatttcgaaaaggcgcgcgat
gtctttgaggagggaatcactaccgtcatgacggttcgtgactttacgctcattttcgac
tcatacgtcgaatttgaggaatccatcattggcagcttgatggaagccgccgccgtgcgt
tcggagaaggggagggttgacgaagaagccgattttgacctcgatcttcgaatgctacgc
tttgagcagttgatggatcggagaccatttttggtgaatgacgttctcctacgacagaat
tccaacaacgtcatcgaatggggcaagagagtcgcgctctggggtgataacaagcaagag
gccgtccaaacatacacagccgccatcgcggcaatcaaccccaagaaggcacatggcaag
ttctcagaactgtgggtgaattacgccaaattgtacgagaatggaggagacttggccact
gcccgagtgatcttcgacaaggccgtcaaagttccgttcaaatcggtggccgagctggcc
gagacatggtgcgaatgggccgagatggagctgcgcgctgaaaactttgacaaagcggtc
agcattatggccaaggcaacccaagcacccaagaagtccactgtggactacttcgacgag
tcactctcgccacagcagcgaattcacaagagctggaagctgtggagtttctatgttgat
cttgtggaaagtgtctcgtccttggaggagactaggaaagtctacgagcggatctttgag
ctccgcattgcgaccccccagacagtcgtcaactactccaacctgctggaagagaaccag
tactttgaggactcatttaaggtatatgagcggggactggacctcttcacatacccagtt
gcctttgagctgtggaatctctacttgaccaaggcggtcgaccgcaagatcggaattgag
cggctccgagacttgtttgagcaagccctggacggctgcccgcccaagttcgccaagccg
ctctatctgatgtatggcaacctggaagaagagcgcggactctcacggcacgcaatgcgc
atctacgaacgtgcgacccgatcggtatccgacgaggaccgattcgagatgtttgaattc
tacatcaccaagtctgcgtcgaattttggtctcacctccgcacggccaatctacgagcgc
gccgttgccgccttaccagaccaagaagcgaaggaaatgtgtctcaaattcgccgagatg
gaacggcggctcggtgagattgaccgtgcgcgtgccatctacggccacgcctcgcagttc
tgcgatccgcggaccaatgcccccttctggcagaaatgggaggcgttcgaagtacagcac
ggaaacgaggacaccttcaaggaaatgctccgcatcaagagaagtgttcagactcagtac
aataccgatgtcaacttcattgcatcccaggccatcgcccgaagccagcaacgcccccag
gagggcgaagacggtgcacccgccgatggagaagatgaggacaaagaccgtgcggatgcc
atggcggcactggagcggcaagctcgcgccccggttggcttcgtcgccgccagctctggt
cccgagggtggtgatcgccccaaaccttctggtcaagctcctccagctgttccagccaac
ccagacgccatcgaccttgacgacgaaatggatgctgagtag
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