Penicillium psychrofluorescens: 300791353
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Entry
300791353 CDS
T11417
Symbol
PFLUO_LOCUS5410
Name
(RefSeq) uncharacterized protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ppsf Penicillium psychrofluorescens
Pathway
ppsf03018
RNA degradation
ppsf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppsf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
300791353 (PFLUO_LOCUS5410)
09123 Folding, sorting and degradation
03018 RNA degradation
300791353 (PFLUO_LOCUS5410)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsf03019
]
300791353 (PFLUO_LOCUS5410)
03041 Spliceosome [BR:
ppsf03041
]
300791353 (PFLUO_LOCUS5410)
Messenger RNA biogenesis [BR:
ppsf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
300791353 (PFLUO_LOCUS5410)
mRNA degradation factors
5'-3' decay
Lsm complex
300791353 (PFLUO_LOCUS5410)
Spliceosome [BR:
ppsf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
300791353 (PFLUO_LOCUS5410)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
300791353
NCBI-ProteinID:
XP_073639467
LinkDB
All DBs
Position
3:<3426302..>3426652
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AA seq
98 aa
AA seq
DB search
MSLQAYINKKVLILTVDGRTLIGTLLSTDQLTNLVLSNTIERIIRTPDDDEPSSQIEHGL
YLIRGDNVVVCGEIDEKIDADIDWAKVKGEVIRGTKNA
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccaagcgtacatcaacaaaaaagtcctcatcctcaccgtggacggccgtacc
ctcatcggcacccttctctctaccgaccaactcacgaacctggtcctctccaacaccatc
gagcgcatcatccgcaccccagacgacgacgagccctcgtcacagatcgagcatggcctg
tacctgatccgcggcgacaacgtggtcgtctgcggcgagatcgatgaaaagattgacgct
gatatcgactgggccaaggtgaagggcgaggtcatccggggcacgaagaatgcatga
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