KEGG   Penicillium psychrofluorescens: 300791353
Entry
300791353         CDS       T11417                                 
Symbol
PFLUO_LOCUS5410
Name
(RefSeq) uncharacterized protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
ppsf  Penicillium psychrofluorescens
Pathway
ppsf03018  RNA degradation
ppsf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppsf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    300791353 (PFLUO_LOCUS5410)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    300791353 (PFLUO_LOCUS5410)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsf03019]
    300791353 (PFLUO_LOCUS5410)
   03041 Spliceosome [BR:ppsf03041]
    300791353 (PFLUO_LOCUS5410)
Messenger RNA biogenesis [BR:ppsf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     300791353 (PFLUO_LOCUS5410)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     300791353 (PFLUO_LOCUS5410)
Spliceosome [BR:ppsf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    300791353 (PFLUO_LOCUS5410)
SSDB
Motif
Pfam: LSM Gemin6
Other DBs
NCBI-GeneID: 300791353
NCBI-ProteinID: XP_073639467
LinkDB
Position
3:<3426302..>3426652
AA seq 98 aa
MSLQAYINKKVLILTVDGRTLIGTLLSTDQLTNLVLSNTIERIIRTPDDDEPSSQIEHGL
YLIRGDNVVVCGEIDEKIDADIDWAKVKGEVIRGTKNA
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtctctccaagcgtacatcaacaaaaaagtcctcatcctcaccgtggacggccgtacc
ctcatcggcacccttctctctaccgaccaactcacgaacctggtcctctccaacaccatc
gagcgcatcatccgcaccccagacgacgacgagccctcgtcacagatcgagcatggcctg
tacctgatccgcggcgacaacgtggtcgtctgcggcgagatcgatgaaaagattgacgct
gatatcgactgggccaaggtgaagggcgaggtcatccggggcacgaagaatgcatga

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