Penicillium psychrofluorescens: 300792630
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Entry
300792630 CDS
T11417
Symbol
PFLUO_LOCUS6560
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
ppsf Penicillium psychrofluorescens
Pathway
ppsf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppsf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
300792630 (PFLUO_LOCUS6560)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsf03021
]
300792630 (PFLUO_LOCUS6560)
03019 Messenger RNA biogenesis [BR:
ppsf03019
]
300792630 (PFLUO_LOCUS6560)
Transcription machinery [BR:
ppsf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
300792630 (PFLUO_LOCUS6560)
Messenger RNA biogenesis [BR:
ppsf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
300792630 (PFLUO_LOCUS6560)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pcf11_C
Pfc11_Clp1_ID
CID
zf_PCFS4
DUF7340
VHS
UBZ_FAAP20
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
300792630
NCBI-ProteinID:
XP_073640603
LinkDB
All DBs
Position
4:complement(<2463088..>2465231)
Genome browser
AA seq
623 aa
AA seq
DB search
MSGLVSDEVAEDYKNSLEDLTTNDRFQISNLTVIAKENTEHAMAISRVLENHIRSTPPPQ
KLPALYVVDSIVKNVGTPYTLFLGRNMYQTFMNAYTLVDSQTRRKLDEMLKTWKEPVPGS
LDTRPVFPPDTTRNIENALIKARTAALQSQQARQPEILRGRGSVTPTNWSTNPQPNMRHP
LPNQPPPTNANGHGFNTSTPPPAHRPDPNLDSLNRDLDALIASARTDFANSPFNPSSQQR
LKALLDLQGILQRQQLTQDQLNLVRDQISALGTSNPLQNAPANGPTASGPPPGSTPPTQS
VSQPLQQLLNPGTLAGLIKATAVRQQPTPPPQLPNALSQMPQIPQSSGTPQPGPAGPDNP
LIAALRARGLLPPASAPPSLPLSGTGGPGLPFMIPGQMGSTPPAQNPQASNINSEVPMTT
ASIKMVALVVSLYEARSNRCGTCGRRFLSTEEGKDKKARHLDWHFKTNQRMAEAARRAQT
RSWYVDERDWIKSREAGDDQGAADPEAAAEDAAADTAKQGPPKHWIRAPNDATLRNTPCP
ICQEKFESSWSEDVQDWIWQDAVKVGPRVYHASCYAEVTKDGPAPARGDTPQARTGTPDS
VLGKRKAEDDSPGHKVRIKMEQA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcctggtgtcggacgaggtcgcggaggactacaagaactcgctggaggatttg
accaccaatgaccgattccagatcagcaacctcaccgtgatcgccaaggagaacaccgag
catgccatggccatctcgcgcgtgctggagaaccacatccgctcgactccgccgccccag
aaacttccagcgctgtatgtagtcgattccatcgtcaagaacgtgggcaccccctacacg
ctgttcctgggccgcaacatgtaccagaccttcatgaacgcctacacgttggtcgactcg
cagacccgtcgcaaactggacgagatgctcaagacctggaaggagcccgtgcccggttcg
ctcgacacccgcccggtctttcctccagacaccacccgcaatatcgaaaacgccctgatc
aaggcccgcaccgccgcactgcagtcgcagcaggcccgccagcctgagatcctgcgtggc
cggggaagcgtcactcccaccaactggtccaccaacccgcagcccaacatgcgccatccg
ctacctaatcaaccgccgccgacgaatgctaatgggcatggattcaatacatcgactcca
ccacctgctcatcggcccgatcccaacctggactctctgaaccgagacttggatgctctg
atcgcctcggctcggacggatttcgccaatagccctttcaacccgtcttcacagcaacgg
ttgaaggcgctgctggatctccagggcatcttgcagaggcagcaattgacccaggaccag
ctgaacctcgtccgggatcaaatctctgcgctggggacctccaatcctcttcagaatgct
cctgcgaatgggccgacggcatcagggcctcccccagggtcgacgccgcccacccagtct
gtctcgcagccattgcagcaactgctcaatcccggaactctggcagggctcatcaaagct
actgccgtccgccagcaacctacaccgccgccacaactgcctaatgccctctctcaaatg
ccccagattcctcagtccagcggcacaccgcagccgggacctgctggccccgacaaccct
ctcattgcggcccttcgggcgcgcggtctgttgccccctgcatccgctccaccgtctctc
cccctttcgggtactggaggccctggtttgccattcatgatccccgggcagatgggctct
acacccccggcccaaaatcctcaggcttcgaacattaattccgaagttcctatgacgact
gcatctataaaaatggttgctctggtagtttccctctatgaagcccggtcgaaccgatgt
ggaacctgcgggcgtcggttcctttccaccgaagaaggcaaggacaagaaagcccgtcat
cttgactggcattttaaaaccaaccagcgcatggcggaagccgccaggcgggcccagacc
cgcagctggtatgtcgatgaaagagattggatcaaatctcgggaagctggcgacgatcaa
ggcgccgccgaccccgaggctgctgctgaagacgctgcggcagacaccgccaaacaaggg
ccccccaagcattggatccgcgccccgaacgacgccacactccgcaacacgccatgcccc
atctgccaggagaaattcgaatcgagctggtccgaggacgtccaggattggatctggcag
gacgcggtcaaggttggccctcgagtctaccatgccagctgctacgccgaagtaaccaag
gatgggcctgctcccgcacgcggtgacacacctcaggcgcggactggtacacccgactca
gtgctaggcaagcggaaggccgaggacgactccccggggcacaaggtgcgcatcaagatg
gagcaggcgtga
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