KEGG   Penicillium psychrofluorescens: 300793225
Entry
300793225         CDS       T11417                                 
Symbol
PFLUO_LOCUS7096
Name
(RefSeq) uncharacterized protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
ppsf  Penicillium psychrofluorescens
Pathway
ppsf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ppsf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    300793225 (PFLUO_LOCUS7096)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppsf03021]
    300793225 (PFLUO_LOCUS7096)
   03019 Messenger RNA biogenesis [BR:ppsf03019]
    300793225 (PFLUO_LOCUS7096)
Transcription machinery [BR:ppsf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     300793225 (PFLUO_LOCUS7096)
Messenger RNA biogenesis [BR:ppsf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     300793225 (PFLUO_LOCUS7096)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_4 zf-CCCH_DUS3L zf-CCCH_12 zf-CCCH_9 zf-CCCH_PARP12 zf-CCCH_11
Other DBs
NCBI-GeneID: 300793225
NCBI-ProteinID: XP_073641131
LinkDB
Position
4:complement(<3827772..>3828533)
AA seq 253 aa
MADVHSAAERLLSTEPTRDPSYDNFSFTPFLRKSFGFGLASDVPVCKAYSEGHCPLGPAC
PDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKGVKCEYLHEYNLRRMPECQ
SFSRSGYCPNGDDCLYQHVREEARLPPCEHYDQGFCELGPLCAKRHVRRRLCRFYLAGFC
PEGKGCPDTHPRWSENLPRPTMRTEKTEEELEQERALIREEQEREKEREREWRSERGRGG
SFMRGRYRGRGRG
NT seq 762 nt   +upstreamnt  +downstreamnt
atggccgacgtccacagcgctgctgagcgccttctctctaccgaacccacccgggatccc
agctacgacaatttctccttcacccctttcctccgtaagagcttcggttttgggttagcc
agcgatgtgcccgtctgcaaggcctacagcgaaggacattgcccccttgggccggcctgt
cctgaccgacaccccacgccctcgcgcgtgacaacctcaaccaccacggcgtccgggttg
gccccgtcaaccacgcacgggtccctggtctgcaagcacttcctcaagggcctctgcaag
aaaggcgtcaagtgcgaatacctacacgaatacaacctacgccggatgccggagtgccag
tccttttcgcggtccggatactgccccaatggcgacgactgcttgtaccagcatgttcgg
gaggaggcccggttaccgccctgcgagcactacgaccaaggattctgcgagttgggcccg
ctgtgcgcgaaacggcacgtgcgccggcgtctctgtcgattctacctggctggattctgc
ccggaaggcaagggttgtcccgatacgcacccgcggtggtcggagaacctgcctcggccg
accatgcggaccgaaaagaccgaggaagaactggagcaggagagggcgctcatccgagag
gagcaggagcgcgagaaggagcgcgagcgcgaatggcgcagtgaacgagggcgtggtggc
agcttcatgcggggacgataccgcggtcgcggacggggatag

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