Penicillium psychrofluorescens: 300793225
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Entry
300793225 CDS
T11417
Symbol
PFLUO_LOCUS7096
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ppsf Penicillium psychrofluorescens
Pathway
ppsf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppsf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
300793225 (PFLUO_LOCUS7096)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsf03021
]
300793225 (PFLUO_LOCUS7096)
03019 Messenger RNA biogenesis [BR:
ppsf03019
]
300793225 (PFLUO_LOCUS7096)
Transcription machinery [BR:
ppsf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
300793225 (PFLUO_LOCUS7096)
Messenger RNA biogenesis [BR:
ppsf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
300793225 (PFLUO_LOCUS7096)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_12
zf-CCCH_9
zf-CCCH_PARP12
zf-CCCH_11
Motif
Other DBs
NCBI-GeneID:
300793225
NCBI-ProteinID:
XP_073641131
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All DBs
Position
4:complement(<3827772..>3828533)
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AA seq
253 aa
AA seq
DB search
MADVHSAAERLLSTEPTRDPSYDNFSFTPFLRKSFGFGLASDVPVCKAYSEGHCPLGPAC
PDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKGVKCEYLHEYNLRRMPECQ
SFSRSGYCPNGDDCLYQHVREEARLPPCEHYDQGFCELGPLCAKRHVRRRLCRFYLAGFC
PEGKGCPDTHPRWSENLPRPTMRTEKTEEELEQERALIREEQEREKEREREWRSERGRGG
SFMRGRYRGRGRG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtccacagcgctgctgagcgccttctctctaccgaacccacccgggatccc
agctacgacaatttctccttcacccctttcctccgtaagagcttcggttttgggttagcc
agcgatgtgcccgtctgcaaggcctacagcgaaggacattgcccccttgggccggcctgt
cctgaccgacaccccacgccctcgcgcgtgacaacctcaaccaccacggcgtccgggttg
gccccgtcaaccacgcacgggtccctggtctgcaagcacttcctcaagggcctctgcaag
aaaggcgtcaagtgcgaatacctacacgaatacaacctacgccggatgccggagtgccag
tccttttcgcggtccggatactgccccaatggcgacgactgcttgtaccagcatgttcgg
gaggaggcccggttaccgccctgcgagcactacgaccaaggattctgcgagttgggcccg
ctgtgcgcgaaacggcacgtgcgccggcgtctctgtcgattctacctggctggattctgc
ccggaaggcaagggttgtcccgatacgcacccgcggtggtcggagaacctgcctcggccg
accatgcggaccgaaaagaccgaggaagaactggagcaggagagggcgctcatccgagag
gagcaggagcgcgagaaggagcgcgagcgcgaatggcgcagtgaacgagggcgtggtggc
agcttcatgcggggacgataccgcggtcgcggacggggatag
DBGET
integrated database retrieval system