Penicillium psychrofluorescens: 300794596
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Entry
300794596 CDS
T11417
Symbol
PFLUO_LOCUS833
Name
(RefSeq) uncharacterized protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ppsf Penicillium psychrofluorescens
Pathway
ppsf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
300794596 (PFLUO_LOCUS833)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsf03019
]
300794596 (PFLUO_LOCUS833)
03036 Chromosome and associated proteins [BR:
ppsf03036
]
300794596 (PFLUO_LOCUS833)
Enzymes [BR:
ppsf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
300794596 (PFLUO_LOCUS833)
Messenger RNA biogenesis [BR:
ppsf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
300794596 (PFLUO_LOCUS833)
mRNA degradation factors
5'-3' decay
Decapping complex
300794596 (PFLUO_LOCUS833)
Chromosome and associated proteins [BR:
ppsf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
300794596 (PFLUO_LOCUS833)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NA-iREase2
QSregVF
Motif
Other DBs
NCBI-GeneID:
300794596
NCBI-ProteinID:
XP_073634929
LinkDB
All DBs
Position
1:<2234099..>2235720
Genome browser
AA seq
502 aa
AA seq
DB search
MADALASQLSNTKLGENPDAKLQDSLNLPPKDARPQTEDVTATKGLEFEDFYIKRELMMG
IFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALIL
VPTRELALQTSQVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLAS
KGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKAFKDKH
MRNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLA
KKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDF
PKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKIEQELGTEIQPIPQNIDKKLYVY
DSPENIPRPISNPAGQDPAPSNGDRQPRRQNHHANGGQYYHRGRGNYRGGRGQGQRRGGH
NDPNKAAFVQGQPAGKPQAPLS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcgcttgcctcccaactcagtaataccaagctaggggaaaacccagacgca
aagcttcaggactccctcaacctaccccccaaagatgcccgaccccaaactgaggatgtc
actgctaccaagggcctcgagttcgaggacttctacatcaagcgtgaactgatgatgggc
atttttgaggctggatttgagaagccttctcccatccaagaagagacgatacccgttgcg
ctcacgggcagagacattttggctcgagcaaagaacggtactggcaaaacagccgccttc
gtcatccccactctagagcgcatcaatcctaagagcaccaagacccaagcactgattttg
gtacccacgagagaacttgcccttcaaacatctcaagtctgcaagacccttgggaaacat
ctggggatcaacgtcatggttactactggtggaactggtttgatggacgatattattcgg
ttgaatgatgctgtccatatccttgtcggaactcccggtcgagtgcttgacttggccagc
aaaggtgtcgccgacctgtcggagtgcccaacctttgtcatggatgaggcagacaagctt
ctatcccctgagttcacaccagtcatcgagcaactcttgtcgttccacccgaaggatcgc
caggtgatgcttttcagcgctacattccccatgattgtcaaggccttcaaggacaagcac
atgcgcaacccttatgagatcaacctgatggacgagctcactctgcggggtatcactcag
tactatgccttcgttgaggagaagcaaaaggttcattgcctcaacacccttttctcgaag
ctccagatcaaccaatcgatcattttctgcaactcgaccaaccgtgtggagcttttggcc
aaaaagatcacggaattgggttattcgtgcttctattctcatgcgcgaatgctccagcag
caccgcaaccgtgtcttccacgatttccgaaacggcgtgtgccgcaatctggtctgttcg
gacttgcttacccgtggtattgatatccaagctgtcaacgttgtcatcaacttcgacttc
cccaagaacgctgagacctacctccaccgtatcggtcgttctggtcgctttggtcacttg
ggtctggccatcaacctcattaactgggatgatcggttcaacttgtacaagatcgagcag
gaactgggcactgaaattcagcccatccctcaaaacattgacaagaagctgtacgtgtat
gactccccagagaacatcccgcgtccgatctccaatcccgcggggcaggacccagcaccc
agcaatggagatcgtcagccccgtcgtcagaatcaccatgccaatggcggacagtattat
caccggggccgaggcaactaccgcggcggccgtgggcaaggccaacggcgtggcgggcac
aacgaccccaacaaagcggcttttgttcaaggtcagccagctggtaagccgcaggcgccc
ctctcgtaa
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