KEGG   Penicillium psychrofluorescens: 300795265
Entry
300795265         CDS       T11417                                 
Symbol
PFLUO_LOCUS8932
Name
(RefSeq) uncharacterized protein
  KO
K12880  THO complex subunit 3
Organism
ppsf  Penicillium psychrofluorescens
Pathway
ppsf03013  Nucleocytoplasmic transport
ppsf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppsf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    300795265 (PFLUO_LOCUS8932)
  09122 Translation
   03013 Nucleocytoplasmic transport
    300795265 (PFLUO_LOCUS8932)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppsf03019]
    300795265 (PFLUO_LOCUS8932)
   03041 Spliceosome [BR:ppsf03041]
    300795265 (PFLUO_LOCUS8932)
Messenger RNA biogenesis [BR:ppsf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     300795265 (PFLUO_LOCUS8932)
Spliceosome [BR:ppsf03041]
 Complex C
  Other components
   EJC/TREX
    300795265 (PFLUO_LOCUS8932)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    300795265 (PFLUO_LOCUS8932)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WDR55 WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_EIPR1 CFAP251_N DSE1_N Cytochrom_D1 Tricorn_2nd Beta-prop_HPS5 Beta-prop_EML eIF2A Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_NOL10_N TP_0598_N Beta-prop_SPT8 WD40_RFWD3 Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_ACSF4 PALB2_WD40 Beta-prop_WDR41 PAC11 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 300795265
NCBI-ProteinID: XP_073642939
LinkDB
Position
6:<1095576..>1096846
AA seq 368 aa
MAPAPRRDLLPKEHFAFAFGKLKTQNYHDPAARAPGSHTIRTLAWNPTGQLIAAGSVDRT
LRIWNPERPNVRYSTDLRGHTAGVEKVVFNPVRDAELASCSTDGTVRFWDVRSKTCVSRL
DIGGEPFTLSWSPDGSTIIAGRKDDILVPISVTSPSTPNILSNGISASPTPSKPNASTYT
ALEPHPQNVQTNATTFSHKISTPSSPDLHFFATTGDGTVKIISYPSFNIQHTLNAHTSAC
SAVALSPLGRYLAIGGSDALISLWDTTDWICRRTLSSENGGAIRNVSWSFDGRFICGAWD
EPGCGGHGLEIFHAESGDSVYTVPTSGNINAGIPAVAWHPSRYWLAYSTTGDGPGSGLKI
VGAAGGGL
NT seq 1107 nt   +upstreamnt  +downstreamnt
atggcgcccgccccgcgccgcgacctcctccccaaggagcacttcgcttttgccttcggc
aagctcaagacccagaactaccatgatccggcagcgcgcgctccaggaagtcacaccatc
cgcaccctcgcatggaatcccaccggccaattaatcgccgcaggctccgtggaccgcacc
ttgcggatctggaacccggagcggcctaatgtgcgctactcgactgacctgcgcggccac
acggccggcgtcgagaaggtcgtcttcaatcccgtgcgagacgcagagctggcgagctgc
tcgacagatgggacggtgcggttctgggacgtacgctctaagacgtgcgtgagccggctg
gatatcggcggcgaaccgtttacgctttcgtggtcgcccgatgggagtactattatcgcc
gggaggaaggatgatatcctcgtccccatatccgtcacatcaccctccacacccaacatc
ctctccaatggcatctccgcctctcccacaccctccaaacccaacgcatcaacctacaca
gccctcgaaccgcacccacaaaacgttcaaacgaacgccacgacattctcacacaaaatc
agcaccccctcctccccggacctgcacttcttcgccacaacgggcgacggcacggtcaag
ataatctcctacccatccttcaacatacaacacaccctaaacgcacacacctccgcctgc
tcagccgtcgccctctccccgctgggccgctacctcgccataggaggcagcgacgcactg
atctcgctctgggacacgacggactggatctgtcggcggacattgtctagcgagaacggc
ggcgcgatccggaatgtcagctggagcttcgatggacggtttatctgtggcgcgtgggat
gagcctgggtgcggtgggcatgggctggagatcttccatgctgagtctggggatagtgtc
tatactgttcccacttcggggaatatcaatgcaggcatccctgctgtggcgtggcatccg
tcgcgctactggttggcatattcgactacgggggatgggccggggagtgggttgaagatt
gttggtgcggccgggggtgggctttga

DBGET integrated database retrieval system