Penicillium psychrofluorescens: 300795445
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Entry
300795445 CDS
T11417
Symbol
PFLUO_LOCUS9094
Name
(RefSeq) uncharacterized protein
KO
K15542
polyadenylation factor subunit 2
Organism
ppsf Penicillium psychrofluorescens
Pathway
ppsf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppsf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
300795445 (PFLUO_LOCUS9094)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsf03019
]
300795445 (PFLUO_LOCUS9094)
Messenger RNA biogenesis [BR:
ppsf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
300795445 (PFLUO_LOCUS9094)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML
DSE1_N
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
ASA1
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_SPT8
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
MIOS_WD40
Beta-prop_WDR41
PAC11
Beta-prop_RIG_1st
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
PAN2_N
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
300795445
NCBI-ProteinID:
XP_073643096
LinkDB
All DBs
Position
6:complement(<1551809..>1553783)
Genome browser
AA seq
603 aa
AA seq
DB search
MAYYDDHGDQAGGRFTKNYDSGPMGPRRPRLVTDYGSSMVQWMRTRRPQYRGGHRMETER
PSASFMLDMLPPMARPYSPADSIPVRHLHQSIGKSKKPITVVRWTPEGRRLLTGGHTGEF
MLWNGTAFNFETVMDAHYDQIQAGVTSIAFSHSQDWLISGGQRGDIKYWRPNFNNVETID
DAHHDAVRDLAWAPGDTKFLSASDDTTLKIFDFTSRTCDAVLSGHNWDVKSCDWHPTKGL
LVSGSKDHQVKFWDPRTTRCLTTLHSHKNIVNTTRFSRVNSNLLATSSRDQTARVFDLRM
MRDICILRGHEKPLSSLTWHPIHSNLISTGSEDGSLHHYLLDEPNLPSGQMPTVAPYDSP
DPANTPAQVIYPAHRIQYAHGATIWSLDWHPLGHILASGSKDNFTRFWSRNRPGETSYLK
DRFHIGEEAAEAQGTWSRGFGRKQMREEEEQEMEDEADSLVDQRRPGAPSLPGIQSAQPD
VPGLLPGIGAAQPPPPPSLPGMPGAIPGMDPGRLAALLSAQQPPQLHSNTPPQGIPGFPM
MPGMGGPPPPPGAPPMNVDMAQLQKQLLAQGFPMPQMSGPPGAFGAGGLPGLHGSGTPDS
NRR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcctactacgacgaccatggggaccaggccgggggccggttcacgaagaactatgac
agcggtccgatgggaccccggcgaccacgactcgtcacggattacggctcgtcgatggtg
caatggatgcgcacgcggcgcccgcagtatagaggaggtcaccgcatggagactgagcga
ccgagtgcgagtttcatgttggatatgcttccacccatggcccgaccttattcccccgcc
gatagcatccccgtgcgacacttacatcagtcgattggaaagtcgaagaagcccattacc
gtggtgcgatggacgcccgaagggagacgcttgttgaccggtggacatacgggggagttt
atgctctggaacggaacggcctttaattttgagacggtcatggatgcacactacgatcaa
atccaagcgggtgtcacctcgatcgcgttctctcatagccaggactggctgatttctggc
ggccaaagaggcgacatcaaatactggcggccgaattttaacaacgtcgagacgatcgat
gacgcgcaccacgatgcagttcgtgacctggcgtgggcgcccggcgataccaagttcctg
tccgcgtcagacgacacgacactcaagatcttcgatttcacttctcgaacctgcgatgcc
gtgctgtctggacacaactgggatgtcaaatcctgtgattggcatccgacaaagggtctg
ttggtgtctgggtcgaaagatcaccaggtcaagttctgggatcctcgcacgacgcggtgt
ctgacgaccctccacagccacaagaacatcgtcaataccacgcgcttctcccgggtgaat
agcaatctgctcgcgacatcatcgcgagatcagactgcaagggtctttgatttacgcatg
atgcgggatatttgcattctacgcgggcatgagaaaccgctctcgtcattgacgtggcat
ccgattcacagcaacttgatttccaccggcagcgaggacggatctttgcaccattattta
ctggatgaaccaaatctgcccagcggccagatgcccacggtggctccgtacgacagccca
gaccccgccaacaccccagcgcaggtgatctacccagcgcatcgtatccaatacgcgcac
ggggccacgatctggtcattggactggcacccgctgggccatatcctagcatccggatct
aaagacaactttactcgattctggtcccgcaaccgtccgggagagacaagctacctgaaa
gaccggttccacatcggcgaagaggccgccgaggcccaagggacatggagtcgcggcttt
ggccggaaacagatgcgcgaggaagaggaacaagaaatggaggacgaagcagacagcctg
gtggaccagcgacggcccggcgcgccttctctgccgggtatccaaagcgctcagcctgat
gtaccgggactgttgccgggtattggcgctgcgcagcctccaccgccaccctcactgcca
ggcatgcctggtgccattccgggcatggacccaggtcgcttggctgctctgttgtctgcc
cagcaacccccgcagttgcatagcaatactccgccacaaggaataccggggttcccaatg
atgccgggaatgggaggtccaccaccaccaccgggtgctccgccaatgaatgtcgacatg
gcacagctgcagaaacagctgcttgcgcagggcttcccgatgccgcaaatgtctggacct
cccggtgcatttggtgccggcgggctacctggtttgcatggaagcgggacaccagacagc
aacagaagataa
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integrated database retrieval system