Pseudomonas psychrophila: G5J76_00050
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Entry
G5J76_00050 CDS
T06988
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppsh03000
]
G5J76_00050
Transcription factors [BR:
ppsh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
G5J76_00050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QIE30717
LinkDB
All DBs
Position
13320..14240
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AA seq
306 aa
AA seq
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MSSRRPDALAQVSDFDIRLLRIFRSVVECGGFSAAETVLGIGRSAISQQMSDLEQRLGLR
LCQRGRAGFSLTEEGREVYQSALQLLGALESFRTEVNGLHQHLRGELTIGLTDNLVTLPH
MRITHALAQLKERGPDVQIHIRMISPHEVEQGVLDGRLHVGVVPQASTLSGLEYQPLYSE
RSLLYCAVGHPLFYVDDRQLEDARLNDQDAIAPTFRLPSDIQAHYQALNCTASASDREGM
AFLILTGRYIGYLPDHYASLWVQQGRLRALKAKTRFYDLSLASVTRKGRRPHLVLESFLE
SLEATR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgtcgtcccgatgcactggcccaggtcagcgactttgatattcgattgctg
cgcatttttcgcagcgtggtggagtgcggcggcttctcggcggcagagacagtgctcggt
ataggccgctcggccatcagccagcaaatgagtgaccttgagcaacgcctgggcttacgc
ctttgccagcgtgggcgcgccgggttctcgctgacagaagaaggccgagaggtctatcag
tcggcgctgcagttactgggcgcactcgaaagttttcgtacagaggtcaacggcctgcac
cagcacttgcgcggcgagctgaccattggactgacagataacctcgtcaccctgccccac
atgcgcatcacccatgccttggcccaactcaaagagcgcggcccggatgtgcaaatccat
atccgcatgatttcgccccacgaagttgaacagggagtactcgacgggcgcctgcatgtg
ggcgtcgtacctcaggccagcacgttgtccgggctggaatatcagccgctctacagcgag
cgctccttgctgtactgcgccgtaggtcatccgttgttttatgtcgatgaccggcaactg
gaagatgcgcggctcaatgaccaagatgccatcgctcctaccttccgcctgccctccgat
attcaggctcactatcaagctctcaactgcaccgccagtgcgtcggaccgcgaaggcatg
gcctttttgattttgaccggacgttacattggctatttacccgatcattacgccagcttg
tgggttcagcagggccggctacgggcgctgaaggcaaaaacgcgtttctacgatttgagc
ctcgcatccgtcacccgtaaaggtcgtcgtccacaccttgtactggaaagtttccttgag
agcctggaggcgacgcgttaa
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