Pseudomonas psychrophila: G5J76_02750
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Entry
G5J76_02750 CDS
T06988
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh03420
Nucleotide excision repair
ppsh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5J76_02750 (uvrD)
03430 Mismatch repair
G5J76_02750 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsh03400
]
G5J76_02750 (uvrD)
Enzymes [BR:
ppsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5J76_02750 (uvrD)
DNA repair and recombination proteins [BR:
ppsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5J76_02750 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
G5J76_02750 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_22
AAA_11
RHH_1
Motif
Other DBs
NCBI-ProteinID:
QIE31218
LinkDB
All DBs
Position
651975..654158
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AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVTASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSVL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPVRQAQWFINGQKDEGLRPKHIQASGDLFLATMRTIYEAYE
VACQRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSTDFPDAETIRLEQNYRSTAGILKAANALIA
NNSGRMGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLAHSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHSDVSMWEAMRQLIANKALPGRASGAISGFIELIDNLAAKVMDMPLH
LMTQTVIEQSGLIAYHQAEKGEKGQARVENLEELVSAARNFESNDEDEELSPLAAFLGHA
SLEAGDTQAEEHEDGIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
KQSASNLFGGSEIPETEFKLGQMVKHAVFGEGVILNFEGAGAQARVQVNFSEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctctcttgttaaattctctcaacgatgcccaacgtcaggccgtc
acggccagtgttgggcgtcagttggttctggccggcgcaggttccggcaaaacccgtgtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcgtcaccccactcagtcctg
tcggtgaccttcaccaacaaggccgccgccgagatgcgccaccgcatcgagcagctgatg
ggtatcaacccggcgggcatgtgggttggcaccttccacgggctggcgcaccgcctgttg
cgggcccactggcaagaagccgggctgagccagacctttcaaatcctcgacagcgatgat
cagcaacgcttggtcaagcgcgtgatccgtgagttggggctggatgagcagcgctggcca
gtgcgtcaggcgcagtggtttatcaacggccaaaaagacgaaggcctgcgccccaaacat
atccaggccagcggcgacttgttcctggccaccatgcgcactatttacgaggcctatgag
gtcgcgtgccagcgtgccggtgtcatcgacttttccgagctgctgctgcgggcccttgac
ctgtggcgcgacaaccctggtctgttggcgcactaccagaaacgcttccgccacattctg
gtggacgaattccaggacaccaacgccgttcaatatgcctggctgcgattgctggcccaa
ggcggcgacagcttgatggtcgtaggcgatgacgaccagtcgatctacggctggcgcggc
gcgaaaatcgagaacatttaccagtactcaaccgactttccggatgccgagactattcgc
ctggagcaaaactatcgctccacggcaggcatcctcaaagcggccaacgccttgattgcc
aacaacagcggccgtatgggcaaagagctgtggacggacggcggtgaaggcgaagcaatc
aatttgtacgccgccttcaacgaacacgatgaggcgcgctacgtggtcgagaccatcgag
agcgcccttaaaaccggcctggcccatagcgatatcgccattctgtaccgttccaacgcc
caatcgcgggtgcttgaagaagcgttgctgcgcgaacgtattccgtaccgcatttatggt
ggccagcgcttcttcgagcgcgcagaaatcaaaaacgccatggcttacatgcgcctgctc
gaaggtcgtggcaatgatgcggcgctggagcgggtcattaacgtaccggctcggggtatc
ggcgaaaaaaccgtcgaagccattcgcgagcacgcacgtcacagcgatgtgtcgatgtgg
gaggccatgcgccagctcatcgccaacaaagctctcccggggcgggcttcaggtgccatt
agcggctttatcgaactgatcgataacctcgcggcaaaagtcatggacatgcctctgcac
ctgatgacccaaacggtgatcgaacagagtgggctgattgcctaccaccaggcggaaaaa
ggtgaaaaaggccaggcccgggtagaaaaccttgaggaactggtcagcgcggcgcgcaac
ttcgaaagcaacgacgaagacgaagagctgtcgccattggccgccttcctcggccatgcc
tcactggaggcaggcgatacccaggccgaagagcatgaagacggtatccagctgatgacg
ctgcacagcgccaagggtctagagtttccgtatgtgttcctggtaggcatggaagaaggc
ttgttcccccacaagatgagcctggaagaacccggtcgccttgaagaggaacggcgcttg
gcttacgtgggtattacccgcgccatgcaaaatctggttatgacttacgctgaaacccga
cgcctgtacggtagcgagacctacaacaaggtttcgcgcttcgtgcgagaagtgcctaaa
ggcctgattcaagaagttcgactgtccaacagcgtcagccgtcctttcggtggaggtcaa
aagcagagcgccagcaacctgtttggtggctcagagatcccagagaccgaattcaaactc
ggccagatggttaagcacgcagtcttcggcgaaggcgtcatcctcaacttcgaaggcgca
ggcgcacaggcccgggttcaagtgaacttctcggaaggcagcaagtggctgatgatgggt
tacgccaaacttgaagcggtctga
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