Pseudomonas psychrophila: G5J76_04135
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Entry
G5J76_04135 CDS
T06988
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5J76_04135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsh03019
]
G5J76_04135
Messenger RNA biogenesis [BR:
ppsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G5J76_04135
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
QIE31483
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All DBs
Position
937631..938110
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AA seq
159 aa
AA seq
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MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
EREDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLVSNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRA
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggtttccgccctaatgtcgggattattctgacaaatgacgctggt
caggtactttgggctcgccgtatcaatcaagacgcctggcagtttccacagggaggtatc
aaccctgatgagacgccggaagacgccttgtaccgtgagctgaacgaagaagttggcctt
gaacgcgaagatgtagaaatactcgcctgcacgcgaggctggttgcgttatcgtttgccg
caacgactggtgcgtacccacagccaaccgctgtgtatcggccagaagcaaaagtggttt
ttgctgcgcctggtctctaacgagcagcgggtgcggatggatttgaccggtaaaccggag
ttcgatggctggcgttgggtcagttattggtacccgttgggccaggtggtgacattcaag
cgcgaggtctaccgtcgcgctctcaaagagcttgccccgcgccttttaacgcgcgcctga
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