Pseudomonas psychrophila: G5J76_04335
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Entry
G5J76_04335 CDS
T06988
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppsh
Pseudomonas psychrophila
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsh03021
]
G5J76_04335 (rpoH)
Transcription machinery [BR:
ppsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G5J76_04335 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
QIE31523
LinkDB
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Position
984864..985718
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVNTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWTDNSTSNLHEALEVLDDRSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcgtatgcgttggtccctggtgcgaaccttgaggcctat
gtaaacacggtgaacagcattccactgctgacaccggagcaggagcgtgaactggccgag
agtctctactatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcgt
tttgttgtacacattgcccgtagttattcgggctatggcctggctcaggctgacctgatc
caggaaggtaacgtcggcctgatgaaggcggtcaaacgctttaaccctgaaatgggcgtg
cgtctggtgtcgttcgccgtgcactggatcaaggcagagatccacgagttcattttgcgt
aactggcggatcgtgaaagtcgcgaccaccaaggctcagcgcaaactgttcttcaacctg
cgcagccagaaaaaacgtttggcctggctgaacaacgacgaagttcatcgtgtggctgaa
agcctcggcgtagaacctcgtgaagtgcgggagatggaaagccgcctgaccggtcatgac
atggccttcgacccggcagctgaagctgacgacgacagtgcattccagtcgccagccaac
tacctggaagatcaccggtacgacccggcgcgccaactggaagatgctgactggactgat
aactccaccagcaacctgcatgaagcgctggaagtgctggatgaccgcagtcgtgacatt
ctgtatcagcgctggctggctgaagagaaagccacgctgcacgacctggcacagaagtac
aacgtgtcagccgagcggatccgtcagcttgaaaaaagcgcgatgaacaagctcaaactg
tcgattgccgcttaa
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