Pseudomonas psychrophila: G5J76_04800
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Entry
G5J76_04800 CDS
T06988
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh00260
Glycine, serine and threonine metabolism
ppsh01100
Metabolic pathways
Module
ppsh_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5J76_04800 (dgcB)
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Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_10
Fer4_8
Fer4_9
Fer4_17
Fer4_2
Fer4_6
Fer4_16
Fer4
Fer4_4
Fer4_7
Fer4_21
Fer4_22
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
QIE31614
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All DBs
Position
1083596..1085539
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AA seq
647 aa
AA seq
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MLTIVLPILLFAALVLALIGAIRRMNMWRRGRPAKVDLLGGLLAMPKRYMVDLHHVVARD
KYMANTHVATAGGFVLAAVLAILVHGLGLHNRILGYALLFATALMFVGALFVFKRRLNPP
SRLSKGPWMRLPKSLLAFSVSFFILTLPVAGLLPEGFGGWVLAAILAVGVLWGVSELFFG
MTWGGPMNHAFAGALHLAWHRRAERFGGGRSTGLKPLDLNDRAAPLGVEKPEDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAHFAGSPYPGKPIGEHGG
NPHQPIVNGLVDADTLWSCTTCRACVEECPMMIEHVDAIVDMRRFLTLEKGATPNNGAQV
LDNLIATDNPGGFAPGGRMNWAADLNLDLMRDKPSVDVLFWVGDGAFDMRNQRTLRAFVK
VLKAARINFAVLGLEERDSGDVARRLGDEATFQALATRNIQTLAQYRFTRIVTCDPHSFH
VLKNEYGAFGGDYLVQHHSTYMAELIDAGLLNLAADTGGSVTYHDPCYLGRYNGEYEAPR
AVLRALGIEVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMDDIRETGAERVAVGC
PQCTVMLEGVVEPRPLIKDIAELVAEALIEDAPSTRSTRREAPEVIA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaatcgttctccccattctgttgttcgcggcactggtcctcgccttgatcggc
gccatccgtcgaatgaacatgtggcgccgtggccgcccggccaaggtcgatttgctgggt
ggcctgctggccatgcccaagcgttacatggtcgatctgcatcacgtggtcgctcgcgac
aaatacatggccaacacccacgtcgccaccgccggcggctttgtgctggcggcggtgctg
gcgattctggtgcacggtctggggctgcataaccgcatcctgggttatgccttgctgttc
gccacggcgctgatgtttgtcggcgcgctctttgtgttcaaacgtcgcctcaacccgccg
tcgcgcttgtccaaaggcccgtggatgcgcctccccaaaagcctgctggcgttctccgtg
agcttttttatcctcaccttgccggtggccggtttgttgcccgaaggctttggcggctgg
gtgctggcggcgatactggccgttggtgtgctgtggggcgtgtcggaactgttcttcggc
atgacctggggcggcccgatgaaccacgccttcgccggagccctgcatctggcctggcat
cgccgggccgagcgtttcggcggtggtcgttccacaggtttgaaacccctggacctgaat
gaccgcgccgcgccgttgggggtggaaaaacccgaggacttcacctggaaccagttgctc
ggtttcgacgcctgcgtgcaatgcggcaagtgcgaagctgcgtgcccggcgtttgccgcc
ggtcaaccgctcaaccccaagaagctgattcaagacatggtggttggtctggcaggtggc
accgatgcacactttgctggcagcccgtaccccggcaaaccgattggtgaacacggcggc
aatccgcatcaacccatcgtcaacggtctggtcgatgcggacacgctgtggtcgtgcacc
acttgccgggcctgtgtcgaagagtgcccgatgatgatcgagcacgtggatgccatcgtc
gacatgcgccgtttcctgaccctggaaaaaggtgcgacgcctaacaacggtgctcaggtg
ctggataacctgattgccaccgacaaccctggcggttttgccccgggtgggcggatgaac
tgggcagcggatttgaatctcgacctgatgcgcgacaagccttcggtggacgtgctgttc
tgggtcggtgacggcgctttcgacatgcgcaaccagcgcaccttgcgtgccttcgtcaaa
gtgctcaaggcggcgcggatcaacttcgcggtactggggctggaggaacgggacagcggc
gacgtggcccggcgcttgggtgatgaggcgacgttccaggccttggccacgcgaaatatc
cagacgctggcgcagtaccgcttcacgcgcatcgtcacctgcgacccccacagttttcat
gtgctgaaaaacgaatacggcgcctttggcggtgactatcttgtgcagcatcacagcact
tacatggccgagctgatcgatgcaggtctactcaacctggccgccgacacagggggcagc
gtgacctatcacgacccgtgctacctgggccgctacaacggcgaatacgaagcaccgcgt
gcggtgctgcgagcgctgggtattgaagtcaaagagatgcagcgctcgggctttcgctcc
cgttgctgcggcggtggcggcggcgctccgattaccgacatcccgggcaaacagcggatt
cccgacatgcgcatggacgacatccgggagaccggcgccgagcgcgtggcggtgggttgc
ccgcaatgcaccgtcatgctcgaaggcgtggttgagccacgcccgctgatcaaagacatt
gccgagctggtggccgaggccctgattgaagatgcgccgtccaccagatcgacccggcgc
gaagccccggaggtgatcgcatga
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