Pseudomonas psychrophila: G5J76_04840
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Entry
G5J76_04840 CDS
T06988
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh00260
Glycine, serine and threonine metabolism
ppsh00460
Cyanoamino acid metabolism
ppsh00630
Glyoxylate and dicarboxylate metabolism
ppsh00670
One carbon pool by folate
ppsh00680
Methane metabolism
ppsh01100
Metabolic pathways
ppsh01110
Biosynthesis of secondary metabolites
ppsh01120
Microbial metabolism in diverse environments
ppsh01200
Carbon metabolism
ppsh01230
Biosynthesis of amino acids
ppsh01240
Biosynthesis of cofactors
ppsh04981
Folate transport and metabolism
Module
ppsh_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G5J76_04840
09102 Energy metabolism
00680 Methane metabolism
G5J76_04840
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5J76_04840
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
G5J76_04840
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
G5J76_04840
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
G5J76_04840
Enzymes [BR:
ppsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
G5J76_04840
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QIE31622
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Position
1093096..1094349
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAMNAEDQRQEDHIELIASENYTSQRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSQANAAVYLALLNAGDTVLGMS
LAHGGHLTHGASVSFSGKLYNAVQYGIDTSTGLIDYDEVERLAVEHQPKMIIAGFSAYSK
FLDFPRFRQIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEALEKKLNSAVFPGGQGGPLMHVIAAKAVCFKEALEPGFKTYQKQVIDNAQAMAE
VFIKRGFDVVSGGTDNHLFLLSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCTELAGWICDILDHLGDADIEADVARQVTSLCKDFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaggatcagatccagggttacgacgatgccttgttagcggcgatgaat
gccgaagatcagcgccaggaagatcacatcgagctgatcgcctccgagaactacaccagc
cagcgtgtgatggaagctcaaggcagcggtctgaccaacaagtacgccgaaggctatccg
ggcaagcgttactacggcggctgcgagcatgtggataaagttgagcaactggctatcgac
cgcgccaagcagctgttcggcgccgattatgccaatgtgcaaccccactccggcagccag
gccaacgcggcggtgtatctggcgctgctcaatgcaggcgacaccgtgctgggcatgagc
ctggcccacggcgggcacttgacccacggcgccagcgtcagtttttccggcaagttgtac
aacgccgtgcagtacggcatcgacacctcaacaggcctgatcgactacgacgaagtagag
cgcctggccgttgagcatcagcccaagatgatcattgccggcttctcggcttactccaaa
ttcctcgactttccgcgctttcgccagattgccgacaaggtaggcgcttacttgtttgtc
gacatggcccacgtggccggtctagtggccgccgggttgtacccgaacccgctgccgtac
gctgacgtggtcaccaccactacccacaaaaccctgcgcggcccacgcggcgggttgatc
ctggccaagtccaacgaggcactggaaaagaaactcaactcggcggtgttccccggtggt
cagggcggcccgctgatgcatgtgatcgcggccaaggcggtgtgcttcaaagaagccctg
gagccgggcttcaagacctatcaaaagcaggtcatcgacaacgctcaggcgatggccgaa
gtgtttatcaagcgtggcttcgacgtggtctcgggcggcaccgacaaccatctgttcctg
ctcagcctgatccgtcagggcctgactggcaaagacgccgacgcagccctgggccgtgct
catatcacggtcaataaaaatgcggtgcccaatgacccgcaatcaccgttcgtgacgtcg
ggcctgcgcatcggtaccccggcagtgaccacgcgcgggttcaaagtggcgcagtgcacg
gagctggctggctggatctgcgacatcctcgatcacctcggcgatgccgatatcgaggcc
gacgtggcacgccaggtgacctcgctgtgcaaagacttcccggtttatcgctga
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