KEGG   Pseudomonas psychrophila: G5J76_04920
Entry
G5J76_04920       CDS       T06988                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ppsh  Pseudomonas psychrophila
Pathway
ppsh03030  DNA replication
ppsh03430  Mismatch repair
ppsh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppsh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G5J76_04920
   03430 Mismatch repair
    G5J76_04920
   03440 Homologous recombination
    G5J76_04920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsh03032]
    G5J76_04920
   03400 DNA repair and recombination proteins [BR:ppsh03400]
    G5J76_04920
Enzymes [BR:ppsh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G5J76_04920
DNA replication proteins [BR:ppsh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     G5J76_04920
DNA repair and recombination proteins [BR:ppsh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     G5J76_04920
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C
Other DBs
NCBI-ProteinID: QIE31638
LinkDB
Position
complement(1111467..1112177)
AA seq 236 aa
MSLLSWLLPRKKPVLSLEQHERLMRLPPATELGDTPMRTQRWVVVDLETSGLNLNRDQVL
SIGAVVIEDGAIDFSQAFERTLLRPDNPLSPSMLLHELGPAAIAAGSDPADALLDFMAFV
GDSPVLAFHAPFDQHMLTRALKDSLGYRLQHPFLDVAGMAPMLCPQVNQREAGLDQWINH
FNLQVEDRHNASADALATAELALILFSRARTQGIDTPQALQQRLNQWQRRKQMHSF
NT seq 711 nt   +upstreamnt  +downstreamnt
atgagcctgttgtcatggttgttgccacgtaaaaaaccggtgctcagccttgagcagcat
gagcgcctgatgcgactgccgcccgcaaccgaattgggcgacacgccaatgcgcacgcaa
cgctgggtggtggttgatcttgaaaccagcggcctgaacctcaatcgcgaccaggtgctg
tcgatcggtgcagtggtcattgaggacggcgccattgattttagccaggcgtttgaacgc
accctgctgcgccccgacaaccctctgagccccagcatgttgttgcatgaactggggcca
gcggccattgccgcaggcagcgacccggcggatgccctgctcgacttcatggcttttgtg
ggcgacagcccggtgctggcattccatgcaccctttgaccagcacatgctcacacgcgcc
ctcaaggacagcctgggctaccgtttgcaacacccgttcctggatgtggcgggcatggcg
ccaatgctgtgcccgcaggtcaatcagcgcgaagccgggctggaccagtggatcaaccac
ttcaacctccaggtcgaagaccgccacaacgccagcgccgacgccctggctaccgctgaa
ctggcgttgatcctcttcagccgtgcccgcactcagggcatcgataccccccaagccctg
caacagcggctcaaccagtggcagcggcgcaagcagatgcacagtttttaa

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