Pseudomonas psychrophila: G5J76_04990
Help
Entry
G5J76_04990 CDS
T06988
Symbol
bioD
Name
(GenBank) dethiobiotin synthase
KO
K01935
dethiobiotin synthetase [EC:
6.3.3.3
]
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh00780
Biotin metabolism
ppsh01100
Metabolic pathways
ppsh01240
Biosynthesis of cofactors
Module
ppsh_M00123
Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
G5J76_04990 (bioD)
Enzymes [BR:
ppsh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.3 dethiobiotin synthase
G5J76_04990 (bioD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_26
CbiA
DUF1611
Motif
Other DBs
NCBI-ProteinID:
QIE31652
LinkDB
All DBs
Position
1127656..1128336
Genome browser
AA seq
226 aa
AA seq
DB search
MSPAYFITGTDTDVGKTTVAAGLLYAARAAGLSTAAGKPVASGCEITPQGLRNADALALM
AESSIKLSYDEVNPVAFEPAIAPHIAAREAGVVLTVRSLLEPMQHILARQADFTLIEGAG
GWRVPLSGQDSLSDLAQALDLPVILVVGVRLGCISHALLTAEAIARDGLQLAGWVANIIG
PKTSRLEENLATLAERLPAPCLGRVPKLKSASAQSVAEYLQLDLLD
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagccctgcgtacttcattaccggtactgataccgatgtgggtaagaccacggtggcg
gcaggtcttttatatgccgcccgtgcagccgggttaagcactgcggcaggcaagccggtt
gcgtccggatgcgaaatcacaccgcagggcctgcgcaatgcagacgcgctggcgttgatg
gccgaaagctcgatcaagttgagttatgacgaggtcaacccggtagcctttgaaccggct
atcgccccgcacatcgctgcgcgcgaagccggggtggtattgacggttcgttcactgctg
gaacccatgcagcacattttggccaggcaggcagatttcaccctgattgagggcgcgggt
ggctggcgcgtgccgctttcagggcaagacagcttgtcggatttggctcaagcgctggat
ctgccggtgattctggtggtgggcgtgcgtttgggttgcatcagccatgcgttactgacc
gccgaagcgattgcccgcgatggcctgcaactggctggctgggtagccaatatcattggt
ccgaaaacctcacgcctggaagaaaacctcgccaccctggccgagcgtctgcctgcaccc
tgcctggggcgagtgccaaaacttaaatcggcatcggcgcaatccgtggctgagtatctg
caactcgatttgctggactga
DBGET
integrated database retrieval system
