Pseudomonas psychrophila: G5J76_05230
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Entry
G5J76_05230 CDS
T06988
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ppsh
Pseudomonas psychrophila
Pathway
ppsh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppsh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5J76_05230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppsh02000
]
G5J76_05230
Transporters [BR:
ppsh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
G5J76_05230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
nSTAND_NTPase5
nSTAND3
AAA_22
AAA_25
Rad17
FeoB_N
AAA_28
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QIE31695
LinkDB
All DBs
Position
1187228..1188352
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AA seq
374 aa
AA seq
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MSEVGASAGADEILVSFRGVQKSYDGENLIVKDLNLEIRKGEFLTLLGPSGSGKTTSLMM
LAGFETPTAGEILLAGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLGFPLSVRGLNRT
DISQRVKRVLSMVQLDAFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQL
REHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRMLYEEPKNT
FVANFIGENNRLNGRLHSQDGDRCVVELSRGEKVQALAVNVGRTGDPVTLSIRPERISLN
GSSESCANRFSGRVEEFIYLGDHVRVRLEVCGMNDFFVKQPIAELDPTLAVGDVVPLGWQ
VEHVRALDPLLEAN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtcggtgcaagcgctggggcggatgagattctggtcagctttcgtggcgtg
caaaagagctacgacggtgaaaacctgatcgtcaaagatctcaatctggagattcgcaaa
ggcgagttcctgaccttgctcgggccttccggttcgggcaaaaccaccagcctgatgatg
ctggccggtttcgagacgcccactgccggtgaaattttgctggccgggcgctcaatcaac
aacgtgccgccacacaagcgcgacattggcatggtgtttcaaaactatgcgttgttcccg
cacatgaccgtggccgaaaacctcggctttcccctgtcggtgcgcgggttgaaccgaacc
gatatcagtcagcgggtcaaacgggtgctgagcatggttcagctcgacgccttcgcccag
cgctacccggcccagctgtctggcggccagcagcaacgcgtggcgctggcccgtgcgctg
gtgttcgagccgcagctggtgctgatggatgaacccttgggggcgctggacaaacaactg
cgtgaacacatgcagatggaaatcaaacacctgcaccaacgcctgggcgtgaccgtggtc
tacgtgacccacgaccagggtgaagcgctgaccatgtccgatcgcgttgccgtgtttcac
caaggtgaaatccagcaaatcgctccgccgcgcatgctctatgaagagccgaaaaacact
tttgttgccaactttatcggcgagaacaaccggctcaatggccgcctgcacagccaggac
ggcgatcgttgtgtggtcgagctgagccggggcgagaaagtccaggccctggcggtgaat
gtcggtcgtacaggtgatccggtgaccctgtcgattcgccctgaacgtatcagcctcaat
ggttccagcgagtcgtgcgccaatcggttctcgggtcgggttgaggagtttatctacctg
ggcgaccacgtccgggtgcgcctggaagtctgcggcatgaacgatttctttgtgaaacag
ccgattgccgagctggaccccaccctggctgtcggcgacgtcgtgccactgggctggcag
gtcgaacatgtacgtgcgctggaccctctcttagaggcgaattga
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